DPOGS200815 | ||
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Transcript | DPOGS200815-TA | 183 bp |
Protein | DPOGS200815-PA | 60 aa |
Genomic position | DPSCF303034 - 81-263 | |
RNAseq coverage | 19x (Rank: top 80%) |
Annotation | ||||
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Heliconius | HMEL016583 | 3e-24 | 92.59% |   |
Bombyx | BGIBMGA005723-TA | 1e-24 | 90.91% |   |
Drosophila | HisCl1-PA | 1e-19 | 85.71% |   |
EBI UniRef50 | UniRef50_Q9VGI0 | 3e-17 | 85.71% | Histamine-gated chloride channel subunit 1 n=28 Tax=Coelomata RepID=Q9VGI0_DROME |
NCBI RefSeq | XP_002097946.1 | 4e-18 | 85.71% | GE24203 [Drosophila yakuba] |
NCBI nr blastp | gi|167987254 | 9e-17 | 85.71% | truncated histamine-gated chloride channel hclBT2 [Drosophila melanogaster] |
NCBI nr blastx | gi|322793634 | 8e-16 | 82.35% | hypothetical protein SINV_11116 [Solenopsis invicta] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0016021 | 5e-19 | integral to membrane | |
GO:0006811 | 5e-19 | ion transport | ||
KEGG pathway |   | |||
InterPro domain | [13-54] IPR006201 | 5e-19 | Neurotransmitter-gated ion-channel | |
Orthology group |   |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS200815-TA
ATGGAGGTGAAGTCTGAGACCAGCTTGTCTCTACGTGATATACTTCCAGTTAAAGCTAAGTACTACGATAAGAATAGGGCTCCAAAACTCTTGGGACAGCCTACTATAGTATACTTTCACGTGACTGTACTATCCTTGGACTCCATCAATGAAGAAAGTATGGTGAGAAGCAAATATATTTAA
>DPOGS200815-PA
MEVKSETSLSLRDILPVKAKYYDKNRAPKLLGQPTIVYFHVTVLSLDSINEESMVRSKYI-