DPOGS200816 | ||
---|---|---|
Transcript | DPOGS200816-TA | 960 bp |
Protein | DPOGS200816-PA | 319 aa |
Genomic position | DPSCF300071 - 843753-869435 | |
RNAseq coverage | 135x (Rank: top 56%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL013034 | 5e-124 | 78.75% |   |
Bombyx | BGIBMGA009871-TA | 7e-91 | 92.98% |   |
Drosophila | Cam-PC | 5e-59 | 73.10% |   |
EBI UniRef50 | UniRef50_E5SQ18 | 1e-57 | 68.83% | EF hand domain containing protein n=3 Tax=Opisthokonta RepID=E5SQ18_TRISP |
NCBI RefSeq | XP_001606150.1 | 1e-87 | 62.37% | PREDICTED: similar to calmodulin [Nasonia vitripennis] |
NCBI nr blastp | gi|345481473 | 8e-97 | 62.39% | PREDICTED: calmodulin-like [Nasonia vitripennis] |
NCBI nr blastx | gi|340723668 | 1e-92 | 62.57% | PREDICTED: calmodulin-like [Bombus terrestris] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0005509 | 2.4e-33 | calcium ion binding | |
KEGG pathway | mdo:100015722 | 2e-57 |   | |
  | K02183 (CALM) | maps-> | Salivary secretion | |
  |   |   | Olfactory transduction | |
  |   |   | Alzheimer's disease | |
  |   |   | Phototransduction - fly | |
  |   |   | Glioma | |
  |   |   | Phosphatidylinositol signaling system | |
  |   |   | Insulin signaling pathway | |
  |   |   | Neurotrophin signaling pathway | |
  |   |   | Melanogenesis | |
  |   |   | Oocyte meiosis | |
  |   |   | Phototransduction | |
  |   |   | GnRH signaling pathway | |
  |   |   | Plant-pathogen interaction | |
  |   |   | Long-term potentiation | |
  |   |   | Gastric acid secretion | |
  |   |   | Vascular smooth muscle contraction | |
  |   |   | Calcium signaling pathway | |
InterPro domain | [237-316] IPR011992 | 2.4e-33 | EF-hand-like domain | |
[217-244] IPR018248 | 1.3e-08 | EF-hand | ||
[290-318] IPR002048 | 2.5e-07 | Calcium-binding EF-hand | ||
Orthology group | MCL17400 |   | Patchy |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS200816-TA
ATGGCGTTCGCAGCGGCACGAATGATTTTAAAAGACAAAAGACGGAAGGCATCTAAGGAAGATTTTAGAGATCCCCGAAATAGGAGCAAGGCTCGGAACAAACCAGCTGATGGCGGTGGTCACGTCAATCAGAAGAATGCCGCTGGACAGAAAACAACACCGACAGGCCAAAAAGGAGCGGCGAGTAAAGGCGGCCCGAAGACCCCCGTGAAGCCATCAGCACAGAAAGGAGCAGTAAAAACGGCGCCTCCCAAACAGGCAGCAGCAGCAGTGAAGACACCTCAAGGGAAGAAGAAGAAGGGACACAAACATCAGCAATACGAACTTATTGTTACCATCAATCTGGAAAAGTTTCCAATAAAAGTTCCGAGGAAGGATGTTGTGTTCTGTGTAAGAAGTAGTTTACTATCGGATATGGCGCAGGCCGACAGAACTGATGACATCTACAATAAAGAATACAGAAGAATACGAAGGATTACCAAAGATTTGGCGACGAGACAAATTTCTTCTGAATATGGTCTTACGGAAGAACAAGTAGCAGAATTCAAGGAGGCTTTCATGCTGTTCGACAAAGACGAAGACGGCACAATAACGATGGCGGAGCTTGGTGTCGTGATGAGATCTCTCGGACAGAGACCTTCCGAGACTGAGTTGCGAGATATGGTGAAGGAAGTCGATCAAGACGGTAATGGTACCATCGAGTTTAATGAGTTCCTTCAGATGATGTCAAAGAAGATGAGGGGTGCTGACGGTGAGGATGAGCTTAGAGAAGCTTTTAGAGTGTTCGACAAGAACAACGACGGTCTGATTTCATCGGTGGAGCTGAGACATGTGATGACGAACCTTGGGGAGAGGCTGAGTGAGGAAGAAGTCGATGACATGATCCGTGAGGCCGACCTCGATGGTGACGGCATGGTTAACTACGATGAGTTTGTGACAATATTGACGTCGAAAAACTAG
>DPOGS200816-PA
MAFAAARMILKDKRRKASKEDFRDPRNRSKARNKPADGGGHVNQKNAAGQKTTPTGQKGAASKGGPKTPVKPSAQKGAVKTAPPKQAAAAVKTPQGKKKKGHKHQQYELIVTINLEKFPIKVPRKDVVFCVRSSLLSDMAQADRTDDIYNKEYRRIRRITKDLATRQISSEYGLTEEQVAEFKEAFMLFDKDEDGTITMAELGVVMRSLGQRPSETELRDMVKEVDQDGNGTIEFNEFLQMMSKKMRGADGEDELREAFRVFDKNNDGLISSVELRHVMTNLGERLSEEEVDDMIREADLDGDGMVNYDEFVTILTSKN-