Monarch geneset OGS2.0

DPOGS200834
TranscriptDPOGS200834-TA810 bp
ProteinDPOGS200834-PA269 aa
Genomic positionDPSCF300071 - 371440-375730
RNAseq coverage952x (Rank: top 13%)
Annotation
HeliconiusHMEL0126404e-6289.93% 
BombyxBGIBMGA009888-TA1e-7083.60% 
Drosophilatra2-PF2e-3861.00% 
EBI UniRef50UniRef50_C0IRC88e-4876.11%Transformer-2 protein n=2 Tax=Penaeus monodon RepID=C0IRC8_PENMO
NCBI RefSeqNP_001119708.16e-8679.30%transformer 2 isoform D [Bombyx mori]
NCBI nr blastpgi|1872813911e-8479.30%transformer 2 isoform D [Bombyx mori]
NCBI nr blastxgi|1872813731e-13087.87%transformer 2 isoform C [Bombyx mori]
Group
Gene OntologyGO:00001661.9e-25nucleotide binding
GO:00036761.1e-24nucleic acid binding
KEGG pathwaytca:6569642e-53 
 K12897 (TRA2)maps-> Spliceosome
InterPro domain[79-185] IPR0126771.9e-25Nucleotide-binding, alpha-beta plait
[107-180] IPR0005041.1e-24RNA recognition motif domain
Orthology groupMCL17401 Patchy
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS200834-TA
ATGTCAGACAGAGAGAGGAGCCGTTCGAGGACCCGCAACGGGTCTAGGGAGCCGGCGCCAAAGCCTGCGGTCATGTCTCGTGGCCATAGCCGGAGCCGGTCTCGCACGCCTCCCCCGCCAAAAGCATCCAGTAGGAAGTACAGAAGCCCGTCTCGCTCGAGGTCGGGGTCCGCTCGTCGTTACCGCGGCAGCCGCTACTCTCGCTCCCGCTCCCGGTCGTACTCGCCCCGCGGCTCCTATCGCCGCTCACACTCGCATAGCCCGATGTCGTCTCGTAGACGGCATCTCGGTGATCGGGAAAATCCGACTCCATCGAGATGTCTCGGAGTGTTCGGTCTCAGTCTCTACACTACTGAACAGCAAATTCATCACATATTTTCAAAATTTGGACCAGTTGACAAAGTTCAAGTTGTGATTGATGCCAAGACTGGACGCTCCCGTGGTTTTTGCTTCGTGTATTTCGAGTCCCAGGACGACGCCAAGGTGGCGAAGAACGAGTGTACTGGCATGGAGATAGACGGACGTCGCATACGAGTAGACTACTCCATCACACAGAGAGCTCACACACCCACACCGGGCATATACATGGGGAAACCCACGCATGTAAGAGGAGATAACGGCTACGACAGACGCAGAGACAGAGATCCCGCCCACAGCGACTACTACTACCGCGGCGGCGGCTACCGCGAGCGCGAGCGCGACTACTACGCCCGCGGCTACCGACACCGCTCGCCGTCCCCTCACTACCGCCGGCGCCGCTACGAGCGCGAGCGCTCCTACTCGCCGCGTAAGTCTTACTACCACCCCTAG

Protein sequence:

>DPOGS200834-PA
MSDRERSRSRTRNGSREPAPKPAVMSRGHSRSRSRTPPPPKASSRKYRSPSRSRSGSARRYRGSRYSRSRSRSYSPRGSYRRSHSHSPMSSRRRHLGDRENPTPSRCLGVFGLSLYTTEQQIHHIFSKFGPVDKVQVVIDAKTGRSRGFCFVYFESQDDAKVAKNECTGMEIDGRRIRVDYSITQRAHTPTPGIYMGKPTHVRGDNGYDRRRDRDPAHSDYYYRGGGYRERERDYYARGYRHRSPSPHYRRRRYERERSYSPRKSYYHP-