| DPOGS200858 | ||
|---|---|---|
| Transcript | DPOGS200858-TA | 582 bp |
| Protein | DPOGS200858-PA | 193 aa |
| Genomic position | DPSCF300071 + 198345-199282 | |
| RNAseq coverage | 2862x (Rank: top 4%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL003529 | 3e-59 | 59.38% | |
| Bombyx | BGIBMGA009845-TA | 3e-79 | 72.54% | |
| Drosophila | mtacp1-PA | 1e-37 | 73.63% | |
| EBI UniRef50 | UniRef50_Q1HPL9 | 3e-59 | 61.46% | Acyl carrier protein n=3 Tax=Bilateria RepID=Q1HPL9_BOMMO |
| NCBI RefSeq | NP_001040477.1 | 5e-60 | 61.46% | NADH dehydrogenase isoform 1 [Bombyx mori] |
| NCBI nr blastp | gi|114052452 | 9e-59 | 61.46% | NADH dehydrogenase isoform 1 [Bombyx mori] |
| NCBI nr blastx | gi|114052452 | 2e-55 | 61.46% | NADH dehydrogenase isoform 1 [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0000036 | 9e-27 | acyl carrier activity | |
| GO:0048037 | 1e-09 | cofactor binding | ||
| KEGG pathway | dgr:Dgri_GH15216 | 2e-42 | ||
| K03955 (NDUFAB1) | maps-> | Huntington's disease | ||
| Oxidative phosphorylation | ||||
| Alzheimer's disease | ||||
| Parkinson's disease | ||||
| InterPro domain | [101-189] IPR009081 | 9e-27 | Acyl carrier protein-like | |
| [129-185] IPR006163 | 1e-09 | Phosphopantetheine-binding | ||
| Orthology group | MCL11453 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS200858-TA
ATGGCTGCCGCAAATCTCGTTCGAAGTGCTTTTAATGGATTATTACGAAAATCCACAACGTATAAAACACCGATAGTATGCAGACTATCCACCGTAGCCCTTCGTCAAAAATTCTATACAGTTAAAGCTTTCGCTAGGACACAAAACATTCTCGACAATAAAAATGGGGTACAATTTCATCGTAAAGTGCAGTTCGCCACGGGACCCGAACGTAAGATAACGCAGCAGGAGATCGAGGACCGAGTGATCAAAGTTTGCAGGGCTTACGACAAGCTCGTATCATGTCAGAATCAGAAAATCACTGTCCGTAACTACAGCGGTGGTCCTCCGCTAACGCTCGATCTTATTAGAAGTAGGGTTATTCTTGTTCTTCAACTTTATGACAAAATTAACCCTGAAAAGCTCTCATTGGAGTCTCATTTTATGACCGACTTGGGTCTAGATTCACTCGACCATGTGGAAGTCATTATGGCAATGGAAGACGAATTTGGGTTTGAAATCCCCGATGGAGATGCCGAGAGACTGGTTAGACCCAAAGACATTGTCCAGTATATTGCTGACAAGGAAGACATTTATCATTGA
>DPOGS200858-PA
MAAANLVRSAFNGLLRKSTTYKTPIVCRLSTVALRQKFYTVKAFARTQNILDNKNGVQFHRKVQFATGPERKITQQEIEDRVIKVCRAYDKLVSCQNQKITVRNYSGGPPLTLDLIRSRVILVLQLYDKINPEKLSLESHFMTDLGLDSLDHVEVIMAMEDEFGFEIPDGDAERLVRPKDIVQYIADKEDIYH-