DPOGS200872 | ||
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Transcript | DPOGS200872-TA | 405 bp |
Protein | DPOGS200872-PA | 134 aa |
Genomic position | DPSCF300071 + 632532-633981 | |
RNAseq coverage | 22104x (Rank: top 0%) |
Annotation | ||||
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Heliconius | HMEL011476 | 2e-72 | 97.76% |   |
Bombyx | BGIBMGA009863-TA | 2e-72 | 97.76% |   |
Drosophila | RpL27-PA | 4e-47 | 74.81% |   |
EBI UniRef50 | UniRef50_P61353 | 3e-49 | 72.06% | 60S ribosomal protein L27 n=117 Tax=Eukaryota RepID=RL27_HUMAN |
NCBI RefSeq | NP_001037235.1 | 4e-71 | 97.76% | ribosomal protein L27 [Bombyx mori] |
NCBI nr blastp | gi|268306458 | 6e-70 | 98.51% | ribosomal protein L27 [Manduca sexta] |
NCBI nr blastx | gi|268306458 | 6e-72 | 98.51% | ribosomal protein L27 [Manduca sexta] |
Group | ||||
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Gene Ontology | GO:0005840 | 1.3e-91 | ribosome | |
GO:0006412 | 1.3e-91 | translation | ||
GO:0005622 | 1.3e-91 | intracellular | ||
GO:0003735 | 1.3e-91 | structural constituent of ribosome | ||
KEGG pathway | nvi:100114558 | 5e-61 |   | |
  | K02901 (RP-L27e, RPL27) | maps-> | Ribosome | |
InterPro domain | [1-134] IPR001141 | 1.3e-91 | Ribosomal protein L27e | |
[3-108] IPR014722 | 1.5e-11 | Translation protein SH3-like, subgroup | ||
[7-35] IPR005824 | 7.1e-07 | KOW | ||
Orthology group | MCL11243 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS200872-TA
ATGGGTAAGATTATGAAGCCAGGGAAGGTGGTACTGGTCCTGAGCGGCCGGTACGCAGGCCGTAAGGCCATCGTCGTGAAGAACTACGACGAGGGCACGTCAGACAAGCCCTACGGCCACGCTTTTGTTGCCGGTATCGACAGGTATCCACGCAAAGTGCACAAGCGGATGGGCAAAAACAAAATCCACAAACGCTCCAAGATAAAGCCTTTCGTTAAGGTGGTCAATTACAATCACCTCATGCCAACCCGTTACTCTGTCGACTTCAGCTTCGAGAAGCTCAGCACAAAGGATCTGAAGGATCCGGCTAAACGCAAGAAGTTGCGATTCAACACACGTGTACGCTTCGAGGAGAGATACAAGAGCGGAAAGAACAAGTGGTTCTTCCAGAAGCTTAGGTTCTAA
>DPOGS200872-PA
MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYSVDFSFEKLSTKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF-