DPOGS200878 | ||
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Transcript | DPOGS200878-TA | 402 bp |
Protein | DPOGS200878-PA | 133 aa |
Genomic position | DPSCF300071 + 855707-864508 | |
RNAseq coverage | 274x (Rank: top 39%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL015053 | 8e-45 | 64.93% |   |
Bombyx | BGIBMGA008861-TA | 2e-44 | 64.93% |   |
Drosophila | TpnC25D-PA | 7e-43 | 62.69% |   |
EBI UniRef50 | UniRef50_UPI00017586FE | 2e-52 | 76.87% | UPI00017586FE related cluster n=1 Tax=unknown RepID=UPI00017586FE |
NCBI RefSeq | NP_001011654.1 | 1e-58 | 83.46% | troponin C type IIb [Apis mellifera] |
NCBI nr blastp | gi|58585256 | 3e-57 | 83.46% | troponin C type IIb [Apis mellifera] |
NCBI nr blastx | gi|380022635 | 3e-57 | 83.46% | PREDICTED: troponin C-like [Apis florea] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0005509 | 4.9e-23 | calcium ion binding | |
KEGG pathway | gga:395855 | 7e-18 |   | |
  | K02183 (CALM) | maps-> | Salivary secretion | |
  |   |   | Olfactory transduction | |
  |   |   | Alzheimer's disease | |
  |   |   | Phototransduction - fly | |
  |   |   | Glioma | |
  |   |   | Phosphatidylinositol signaling system | |
  |   |   | Insulin signaling pathway | |
  |   |   | Neurotrophin signaling pathway | |
  |   |   | Melanogenesis | |
  |   |   | Oocyte meiosis | |
  |   |   | Phototransduction | |
  |   |   | GnRH signaling pathway | |
  |   |   | Plant-pathogen interaction | |
  |   |   | Long-term potentiation | |
  |   |   | Gastric acid secretion | |
  |   |   | Vascular smooth muscle contraction | |
  |   |   | Calcium signaling pathway | |
InterPro domain | [59-131] IPR011992 | 4.9e-23 | EF-hand-like domain | |
[106-131] IPR018248 | 1.5e-08 | EF-hand | ||
[105-133] IPR002048 | 1e-06 | Calcium-binding EF-hand | ||
Orthology group | MCL22583 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS200878-TA
ATGTTCGACTCGAACAAGCAGGGAAGAATTGAGAAGGAGAAAGTGCGTACTATCCTGAACACGATGGTACACAGCTTCGATGACAACGAGCTGGACCAGAGGCTGGAGACCGAGGATGTTGACGGTTCGGGAAAGCTAAACTTTGATTCATTTGTGCGGGTTGCGACGCATTTCCTTGACGAGGACGACGAAGCCTTGCAAAAGGAACTGAAAGAAGCTTTCAGGCTTTACGACAAAGAAGGCAACGGTTACATCCCAACATCCAGCCTCCGTGAGATACTAGCAGCACTCGATGATCAACTAACTCCTGACCAACTCAATGAGATGATAGCCGAGATAGATACAGACTCCTCAGGCACTGTTGACTTCGATGAATTCATGGAGATGATGACTGGTGATTAA
>DPOGS200878-PA
MFDSNKQGRIEKEKVRTILNTMVHSFDDNELDQRLETEDVDGSGKLNFDSFVRVATHFLDEDDEALQKELKEAFRLYDKEGNGYIPTSSLREILAALDDQLTPDQLNEMIAEIDTDSSGTVDFDEFMEMMTGD-