| DPOGS200901 | ||
|---|---|---|
| Transcript | DPOGS200901-TA | 291 bp |
| Protein | DPOGS200901-PA | 96 aa |
| Genomic position | DPSCF300066 + 8964-32252 | |
| RNAseq coverage | 503x (Rank: top 25%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL013396 | 6e-29 | 98.31% | |
| Bombyx | BGIBMGA000669-TA | 4e-30 | 100.00% | |
| Drosophila | Socs16D-PA | 4e-35 | 76.92% | |
| EBI UniRef50 | UniRef50_UPI0002247BF6 | 9e-40 | 81.72% | UPI0002247BF6 related cluster n=1 Tax=unknown RepID=UPI0002247BF6 |
| NCBI RefSeq | XP_001603336.1 | 1e-40 | 81.72% | PREDICTED: similar to CG8146-PA [Nasonia vitripennis] |
| NCBI nr blastp | gi|345495165 | 3e-39 | 81.72% | PREDICTED: hypothetical protein LOC100119593 [Nasonia vitripennis] |
| NCBI nr blastx | gi|380019729 | 3e-36 | 81.91% | PREDICTED: uncharacterized protein LOC100866731 [Apis florea] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0035556 | 6.9e-15 | intracellular signal transduction | |
| KEGG pathway | nvi:100119593 | 3e-40 | ||
| K04700 (SOCSN) | maps-> | Jak-STAT signaling pathway | ||
| InterPro domain | [44-87] IPR001496 | 6.9e-15 | SOCS protein, C-terminal | |
| Orthology group | MCL12341 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS200901-TA
ATGTTCAAGGCGCAGACTATAGTGGAATTCATCGAGAACGCTGTCGAAACGTCTCGGAGCGGCCGCTACTTATTCTTCTTGAACTTGAGGCCAGTCCTTGGTCCGGTGAGGGTCCAGCTGCTATATCCTGTATCAAGATTCAAGAGGGTGCAGAGCTTGCAGCATATGTGCAGGTTCGTCATACTAAAGCACGTGCGTCGCGATCTGATCAGCAGCCTGCCGCTGCCGAGGCGTCTCCTAGACTACCTGAGCGCCACCCACTACTATTCAGAGCTTTTGGCGGAGATATAA
>DPOGS200901-PA
MFKAQTIVEFIENAVETSRSGRYLFFLNLRPVLGPVRVQLLYPVSRFKRVQSLQHMCRFVILKHVRRDLISSLPLPRRLLDYLSATHYYSELLAEI-