DPOGS200910 | ||
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Transcript | DPOGS200910-TA | 495 bp |
Protein | DPOGS200910-PA | 164 aa |
Genomic position | DPSCF300066 + 343489-347649 | |
RNAseq coverage | 599x (Rank: top 21%) |
Annotation | ||||
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Heliconius | HMEL012220 | 3e-67 | 68.26% |   |
Bombyx | BGIBMGA010016-TA | 9e-57 | 61.59% |   |
Drosophila | dod-PA | 1e-57 | 66.05% |   |
EBI UniRef50 | UniRef50_Q13526 | 4e-47 | 57.76% | Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 n=160 Tax=root RepID=PIN1_HUMAN |
NCBI RefSeq | NP_001040206.1 | 3e-67 | 73.37% | rotamase Pin1 [Bombyx mori] |
NCBI nr blastp | gi|114052054 | 4e-66 | 73.37% | rotamase Pin1 [Bombyx mori] |
NCBI nr blastx | gi|114052054 | 1e-66 | 74.56% | rotamase Pin1 [Bombyx mori] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0016853 | 8.5e-26 | isomerase activity | |
GO:0005515 | 8.7e-13 | protein binding | ||
KEGG pathway | dmo:Dmoj_GI15719 | 6e-63 |   | |
  | K09578 (PIN1) | maps-> | RIG-I-like receptor signaling pathway | |
InterPro domain | [60-163] IPR000297 | 8.5e-26 | Peptidyl-prolyl cis-trans isomerase, PpiC-type | |
[9-39] IPR001202 | 8.7e-13 | WW/Rsp5/WWP | ||
Orthology group | MCL11684 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS200910-TA
ATGGCTACTAGTAATGAAGATACTTTGCCAGAAGGATGGGAGGCCCGTAAGAGCAGAAGTACAGGTATGACGTACTATCTGAACATGCATACCAAGAAGTCACAATGGGATAAGCCAGACGAGCCGGCACCATTGGTTGATGAGGGTGATGATACACCCTCGCTAGTCCAATGCAGCCATTTGCTGGTGAAGCATAGTGGCAGCCGTCGCCCGTCCTCCTGGCGCGAAGAAAACATTACTCGTTCTAAGGAAGAGGCTATGGAGATTTTGGCGGACTATCGGCGCAAGATCGTTGAAAAGGAAGCTACCTTCGAGGAGCTGGCTCGCAAGTTCTCTGATTGTTCTTCAGCTAAGCGTGATGGAGATTTGGGTAGATTTGGCAAGGGGCAGATGCAGAAACCGTTCGAGCAAGTCGCCTTTTCTCTGAGACTTGGCCAGCTCAGCCAGATCGTCGATACTGACTCTGGAGTGCACATCATTCTCCGGACCGCTTAA
>DPOGS200910-PA
MATSNEDTLPEGWEARKSRSTGMTYYLNMHTKKSQWDKPDEPAPLVDEGDDTPSLVQCSHLLVKHSGSRRPSSWREENITRSKEEAMEILADYRRKIVEKEATFEELARKFSDCSSAKRDGDLGRFGKGQMQKPFEQVAFSLRLGQLSQIVDTDSGVHIILRTA-