| DPOGS200914 | ||
|---|---|---|
| Transcript | DPOGS200914-TA | 627 bp |
| Protein | DPOGS200914-PA | 208 aa |
| Genomic position | DPSCF300066 + 460201-462115 | |
| RNAseq coverage | 289x (Rank: top 38%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL012729 | 2e-46 | 77.78% | |
| Bombyx | BGIBMGA000682-TA | 1e-48 | 87.00% | |
| Drosophila | Rab21-PC | 1e-61 | 62.36% | |
| EBI UniRef50 | UniRef50_P35282 | 1e-75 | 67.96% | Ras-related protein Rab-21 n=60 Tax=root RepID=RAB21_MOUSE |
| NCBI RefSeq | XP_001948825.1 | 2e-78 | 66.98% | PREDICTED: similar to Ras-related small GTPase [Acyrthosiphon pisum] |
| NCBI nr blastp | gi|307190847 | 4e-80 | 72.22% | Ras-related protein Rab-21 [Camponotus floridanus] |
| NCBI nr blastx | gi|307190847 | 1e-79 | 70.81% | Ras-related protein Rab-21 [Camponotus floridanus] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0007264 | 1.2e-68 | small GTPase mediated signal transduction | |
| GO:0005525 | 1.2e-68 | GTP binding | ||
| GO:0015031 | 1.2e-68 | protein transport | ||
| GO:0016020 | 1.7e-30 | membrane | ||
| GO:0007165 | 1.7e-30 | signal transduction | ||
| GO:0006184 | 1.7e-30 | GTP catabolic process | ||
| GO:0003924 | 1.7e-30 | GTPase activity | ||
| GO:0005622 | 4e-12 | intracellular | ||
| GO:0006886 | 4.5e-05 | intracellular protein transport | ||
| GO:0006913 | 4.5e-05 | nucleocytoplasmic transport | ||
| KEGG pathway | ||||
| InterPro domain | [11-174] IPR003579 | 1.2e-68 | Small GTPase superfamily, Rab type | |
| [12-172] IPR001806 | 6e-56 | Small GTPase superfamily | ||
| [8-174] IPR020849 | 1.7e-30 | Small GTPase superfamily, Ras type | ||
| [10-164] IPR005225 | 1.4e-26 | Small GTP-binding protein domain | ||
| [13-174] IPR003578 | 4e-12 | Small GTPase superfamily, Rho type | ||
| Orthology group | MCL16147 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS200914-TA
ATGACCACAGTCCAAAGTGGTACACACAATTTTAAAGTAGTTTTGTTAGGAGAAGGCTGCGTCGGAAAAACATCTTTATTACTGCGATATATTGAAGACAAATATAATGACAAACATCTTACGACGCTCCAAGCAACCTTTCTCAACAAGAAATTGAACATAAATGGAAAACGCATAAACCTCTCTATTTGGGACACAGCCGGACAGGAGAAATTTCATGCCCTTGGACCAATTTACTATCGGAACTCGAATGGCGCCATACTTGTTTATGATATAACTGACGAGGATTCTTTTGGAAAAGTAAAGAATTGGGTTAAGGAGTTAAGAAAGATGCTCGGCTCCGACATTGTGTTGGTAATTGCAGGCAATAAAATTGATTTGGAGCAGGACAGGACTGTGCCGTTGGAGGAAGCTGAGAGTTATGCGGTAATGGTAGGTGCGAGGCATTTTAATACATCAGCTAAAATGAATCAAGGTGTTGAGGAGTTATTCCTTGAACTGACGAGGGAGATGACGGAAAGATTTGAACAAAATTCTCAAGCCGATGTGTCAAGGACGTCCAGGGTTCTGGTTGTCGAAGATGAAGCCCCACAGCAGTCTTCTTGCTGCTCAGGAATTAGGAACTAA
>DPOGS200914-PA
MTTVQSGTHNFKVVLLGEGCVGKTSLLLRYIEDKYNDKHLTTLQATFLNKKLNINGKRINLSIWDTAGQEKFHALGPIYYRNSNGAILVYDITDEDSFGKVKNWVKELRKMLGSDIVLVIAGNKIDLEQDRTVPLEEAESYAVMVGARHFNTSAKMNQGVEELFLELTREMTERFEQNSQADVSRTSRVLVVEDEAPQQSSCCSGIRN-