DPOGS200921 | ||
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Transcript | DPOGS200921-TA | 279 bp |
Protein | DPOGS200921-PA | 92 aa |
Genomic position | DPSCF300301 - 127198-127975 | |
RNAseq coverage | 518141x (Rank: top 0%) |
Annotation | ||||
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Heliconius | HMEL002518 | 4e-48 | 98.91% |   |
Bombyx | BGIBMGA000395-TA | 8e-20 | 95.83% |   |
Drosophila | RpL37a-PA | 6e-42 | 89.13% |   |
EBI UniRef50 | UniRef50_Q9VXX8 | 1e-39 | 89.13% | Probable 60S ribosomal protein L37-A n=82 Tax=Eukaryota RepID=RL371_DROME |
NCBI RefSeq | NP_001037247.1 | 5e-45 | 97.85% | ribosomal protein L37 [Bombyx mori] |
NCBI nr blastp | gi|20139580 | 4e-45 | 98.91% | ribosomal protein L37 [Spodoptera frugiperda] |
NCBI nr blastx | gi|20139580 | 6e-48 | 98.91% | ribosomal protein L37 [Spodoptera frugiperda] |
Group | ||||
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Gene Ontology | GO:0005840 | 1.8e-70 | ribosome | |
GO:0006412 | 1.8e-70 | translation | ||
GO:0005622 | 1.8e-70 | intracellular | ||
GO:0003735 | 1.8e-70 | structural constituent of ribosome | ||
KEGG pathway | dme:Dmel_CG9091 | 7e-40 |   | |
  | K02922 (RP-L37e, RPL37) | maps-> | Ribosome | |
InterPro domain | [1-92] IPR001569 | 1.8e-70 | Ribosomal protein L37e | |
[1-55] IPR011331 | 6.7e-30 | Ribosomal protein L37ae/L37e, N-terminal | ||
[1-55] IPR011332 | 1e-25 | Ribosomal protein, zinc-binding domain | ||
Orthology group | MCL15290 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS200921-TA
ATGACGAAAGGTACATCAAGTTTCGGTAAACGCCGGAATAAGACACATACATTGTGTAGACGATGTGGAAGATCGTCCTATCATATTCAAAAGTCTCAATGCGCTCAATGCGGATACCCTGCAGCTAAACTGCGTTCCTACCACTGGTCAGTTAAGGCCAAGCGCAGGAAGACCACAGGCACTGGTCGCATGCGTCACCTTAAGATCGTAAGAAGGCGTTTCCGCAACGGCTTCAAGGAAGGAAAACCCACCCCCAAGAAAGCTGTTGCCTCATCGTAG
>DPOGS200921-PA
MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSQCAQCGYPAAKLRSYHWSVKAKRRKTTGTGRMRHLKIVRRRFRNGFKEGKPTPKKAVASS-