Monarch geneset OGS2.0

DPOGS200923
TranscriptDPOGS200923-TA1554 bp
ProteinDPOGS200923-PA517 aa
Genomic positionDPSCF300301 - 109168-113876
RNAseq coverage238x (Rank: top 43%)
Annotation
HeliconiusHMEL0025190.074.95% 
BombyxBGIBMGA000398-TA0.081.87% 
DrosophilaCG1140-PA0.064.00% 
EBI UniRef50UniRef50_P558090.070.70%Succinyl-CoA:3-ketoacid-coenzyme A transferase 1, mitochondrial n=574 Tax=root RepID=SCOT1_HUMAN
NCBI RefSeqNP_001171772.10.073.13%succinyl-CoA:3-ketoacid-coenzyme A transferase 1, mitochondrial precursor [Saccoglossus kowalevskii]
NCBI nr blastpgi|3214782520.069.79%hypothetical protein DAPPUDRAFT_220335 [Daphnia pulex]
NCBI nr blastxgi|2964342050.073.13%succinyl-CoA:3-ketoacid-coenzyme A transferase 1, mitochondrial precursor [Saccoglossus kowalevskii]
Group
Gene OntologyGO:00469529.4e-180ketone body catabolic process
GO:00084102.8e-82CoA-transferase activity
GO:00081522.8e-82metabolic process
KEGG pathwayhsa:50190.0 
 K01027 (OXCT)maps-> Valine, leucine and isoleucine degradation
    Butanoate metabolism
    Synthesis and degradation of ketone bodies
InterPro domain[38-509] IPR0041650Coenzyme A transferase
[27-516] IPR0143889.4e-1803-oxoacid CoA-transferase
[296-501] IPR0127913.7e-913-oxoacid CoA-transferase, subunit B
[38-266] IPR0127924.7e-703-oxoacid CoA-transferase, subunit A
Orthology groupMCL10983 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS200923-TA
ATGGCTGTTACCGCTAACAAGTTTATTATTTTAAAATCGTTTTCTAAAGTTAAAATATTTACCGCTGCTAAGATATTGTCATGTGCGTCATATAGCACCTCATCTGAAACTAATAAAATATATAGCAATATAAATGAAGCTGTAAAAGATATAAAAGATGGTTCCAAAATCCTTGTAGGTGGTTTTGGTCTGTGTGGTATTCCTGAAAATCTTATTAAAGCAGTCAACAATAAAACAGTATCTGGTCTTACTGTTGTCTCTAATAATGCAGGAGTTGAAGATTTTGGTTTGGGTATCTTACTGAAGAAGAAACAAGTGAAGAGGATGATTTCATCCTATGTTGGCGAAAATGCTGAATTTGAAAGGCAATTCTTAAACGGAGAGTTGGAGGTAGAACTTACACCACAAGGAACATTAGCGGAGCGAATCAGGGCTGGCGGAGCTGGCATTCCTGCATTTTTTACACCCACTGGGTATGGTACTTTAATACATGAAGGTGGTGCCCCTATTAAGTATACAGCTGATGGAAAGATAGACATACCAAGTAAGCCACGACATGTCCAACAATTCAATGGCATTAACTACATTATGGAGGAAGCTATAACTGGTGATTTTGCACTCGTTAAAGCCTGGAAAGCCGATAGACATGGTAACTTGGTATTCAGAAAAAGTGCACGTAACTTTAATCCTGCTGTTTGTAAGGCTGCAAAGATAACAATTGCGGAAGTTGAAGAGATCGTTGATGAAATTGAACCAGATTTTGTGCATGTACCATCTATTTATGTGCACAGGATTATAGTTGGAGAAAAGTATGAGAAACGCATCGAAAGAAAAACCATTAGTAAACCTAAAGAAGATAAGCCAAAAAGGGCAGCAGATCTGATGAGGGAGAGAATAATTAAGAGGGCAGCTTTGGAATTCAAGGATGGAATGTTTGCTAACCTGGGAATAGGTATGCCAATGCTGGCCAGCAACTATATCCCAAAGAATGTTAAAGTTTTATTACAATCTGAGAATGGGATACTTGGCCTTGGTCCATTCCCAACTGAAGATGAAGTAGACCCTGATTTAATTAATGCTGGCAAGGAAACTGTCACTGTTCTACCTGGTGCTTCATACTTTTCATCAGATGATAGTTTTGCTATGATCCGTGGTGGTCACATAGATCTCACAGTCCTGGGTGCTATGCAGGTCTCGAGATACGGCGACCTTGCTAATTGGATGATACCTGGTAAAATGGTGAAAGGTATGGGAGGCGCAATGGATCTGGTATCAGCGCCTCGCACCAAGGTTGTTGTGACAATGGAACATGCGGCCAAGAACGGCTCACACAAAATATTACCAGAATGCACTTTACCACTCACCGGCAAGAACTGTGTGGATATGATCATTACTGAAAAGTGTGTCTTCGATGTCGACAAGGAAAAAGGTTTGATTTTGACGGAACTGGCTGAAGGCGTCACCATAGAGGATGTTATCGTAAGCACGGGCTGTGAATTCAATGTATCTGATAATATCAAGATAATGGGTGACGTCACAAAAGTCACCGAATAA

Protein sequence:

>DPOGS200923-PA
MAVTANKFIILKSFSKVKIFTAAKILSCASYSTSSETNKIYSNINEAVKDIKDGSKILVGGFGLCGIPENLIKAVNNKTVSGLTVVSNNAGVEDFGLGILLKKKQVKRMISSYVGENAEFERQFLNGELEVELTPQGTLAERIRAGGAGIPAFFTPTGYGTLIHEGGAPIKYTADGKIDIPSKPRHVQQFNGINYIMEEAITGDFALVKAWKADRHGNLVFRKSARNFNPAVCKAAKITIAEVEEIVDEIEPDFVHVPSIYVHRIIVGEKYEKRIERKTISKPKEDKPKRAADLMRERIIKRAALEFKDGMFANLGIGMPMLASNYIPKNVKVLLQSENGILGLGPFPTEDEVDPDLINAGKETVTVLPGASYFSSDDSFAMIRGGHIDLTVLGAMQVSRYGDLANWMIPGKMVKGMGGAMDLVSAPRTKVVVTMEHAAKNGSHKILPECTLPLTGKNCVDMIITEKCVFDVDKEKGLILTELAEGVTIEDVIVSTGCEFNVSDNIKIMGDVTKVTE-