MonarchBase - Protein-coding gene

DPOGS200940
Transcript	DPOGS200940-TA	525 bp
Protein	DPOGS200940-PA	174 aa
Genomic position	DPSCF300215 - 271053-272018
RNAseq coverage	61x (Rank: top 68%)

Annotation
*Heliconius*	HMEL004676	2e-27	66.29%
*Bombyx*	BGIBMGA010205-TA	2e-51	90.98%
*Drosophila*	n-syb-PE	9e-45	80.37%
EBI UniRef50	UniRef50_B4PDQ3	3e-44	68.99%	GE20941 n=11 Tax=Coelomata RepID=B4PDQ3_DROYA
NCBI RefSeq	XP_002432199.1	4e-47	75.40%	synaptobrevin, putative [Pediculus humanus corporis]
NCBI nr blastp	gi\|242023558	5e-46	75.40%	synaptobrevin, putative [Pediculus humanus corporis]
NCBI nr blastx	gi\|242023558	4e-45	82.46%	synaptobrevin, putative [Pediculus humanus corporis]

Group
Gene Ontology	GO:0016021	4e-31	integral to membrane
	GO:0016192	4e-31	vesicle-mediated transport
KEGG pathway	phu:Phum_PHUM576430	1e-46
	K13504 (VAMP2)	maps->	Salivary secretion
			SNARE interactions in vesicular transport
			Vasopressin-regulated water reabsorption
InterPro domain	[58-139] IPR001388	4e-31	Synaptobrevin
Orthology group	MCL25714		Lepidoptera specific

Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS200940-TA
ATGTTAGCTTGGCGTCCTTGCGCTGCTGATATGGCATCGTGCCAGACTGGTATTGAAAAAAGGGCAGCACTAGAAGGCGGCACTCCTGGGGGTCTTGCCCCGGCGGAGCCCCAGACCGGTCCAGATGGTGAAATCATCGGAGGACCTCGTACTCCACAACAGATTGCTGCCCAAAGGAGGCTACAACAGACCCAGGCGCAAGTCGATGAAGTTGTGGATATTATGAAATCTAACGTCGAGAAGGTATTAGACAGAGATGCCAAACTATCAGAACTTGATGATAGAGCAGACGCGCTTCAGCAGGGAGCATCGCAGTTTGAACAGCAAGCTAAGAGTTTGAAGAACAAATTTTGGCTTCAAAATCTTAAGATGATGATTATTATGGGGGTGATTGGTATCGTTATCATTGGACTCCTGTTTGGTGAGTATACTAAGATTGTTACTATGAAACTAGATGTTACTTATGATTGTTTAGATGTGTCATGGCCGTTAGTACCTGTGATATTTGTTAAAATAGTGTTTTAA

Protein sequence:

>DPOGS200940-PA
MLAWRPCAADMASCQTGIEKRAALEGGTPGGLAPAEPQTGPDGEIIGGPRTPQQIAAQRRLQQTQAQVDEVVDIMKSNVEKVLDRDAKLSELDDRADALQQGASQFEQQAKSLKNKFWLQNLKMMIIMGVIGIVIIGLLFGEYTKIVTMKLDVTYDCLDVSWPLVPVIFVKIVF-

Monarch geneset OGS2.0

Nucleotide sequence:

Protein sequence: