DPOGS200953 | ||
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Transcript | DPOGS200953-TA | 561 bp |
Protein | DPOGS200953-PA | 186 aa |
Genomic position | DPSCF300215 - 4197-8888 | |
RNAseq coverage | 150x (Rank: top 53%) |
Annotation | ||||
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Heliconius | HMEL010527 | 4e-63 | 75.81% |   |
Bombyx | BGIBMGA010131-TA | 3e-80 | 83.87% |   |
Drosophila | ix-PA | 4e-36 | 51.45% |   |
EBI UniRef50 | UniRef50_D1FXH5 | 1e-78 | 81.82% | Intersex-like protein n=3 Tax=Endopterygota RepID=D1FXH5_9NEOP |
NCBI RefSeq | NP_001037105.1 | 9e-78 | 83.33% | mediator of RNA polymerase II transcription subunit 29 [Bombyx mori] |
NCBI nr blastp | gi|229893777 | 3e-78 | 81.82% | intersex-like protein [Maruca vitrata] |
NCBI nr blastx | gi|229893777 | 2e-85 | 86.17% | intersex-like protein [Maruca vitrata] |
Group | ||||
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Gene Ontology | GO:0016592 | 2.3e-57 | mediator complex | |
KEGG pathway |   | |||
InterPro domain | [45-185] IPR021018 | 2.3e-57 | Mediator complex, subunit Med29, metazoa | |
Orthology group | MCL11837 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS200953-TA
ATGCACGTGCCAATGAACCCTGTGGGGGCGAACCCTAACGTAGGGATGCAAGGAATGCCGGTGTCCGTTTCAATCATGCCCGTCGCTTCGCCCCAGCAGATGCAACCAGTAATGGCTCCTCAACCTCCTCAGCAGGATAAAATGGACAATATATCCAAAGTTAAAACATTAATGGGATCTCTTCGTGAATCCCTACCGATGACATTAAAATCAGCGGCTCAAATATTGCATCTCAATTACAACATAGACTCAAATACCCAAAAAGGCATCGATAATCCTGTCCCGAGATTTGACAAGAATTTAGAGGAGTTTTTTTCACTTTGTGATCAAATGGAGTTACATTTAAGAACAGCGATAACCTGTATCCAACAAGCACAGTCTGCAGCTCATTATTTACCTTTGACCGTCATACCTTCAAGATTGGACTCCGGACCTACGACACAGGAAACAACACTGAGCTACCCTCAATACCTCAACACCGTGCGTCTTCAAATATCATACGCTAAGGACATCCACGACACACTGGTCGCCGCAGCACAGAACATATCCCCGACGGAATAA
>DPOGS200953-PA
MHVPMNPVGANPNVGMQGMPVSVSIMPVASPQQMQPVMAPQPPQQDKMDNISKVKTLMGSLRESLPMTLKSAAQILHLNYNIDSNTQKGIDNPVPRFDKNLEEFFSLCDQMELHLRTAITCIQQAQSAAHYLPLTVIPSRLDSGPTTQETTLSYPQYLNTVRLQISYAKDIHDTLVAAAQNISPTE-