| DPOGS200974 | ||
|---|---|---|
| Transcript | DPOGS200974-TA | 222 bp |
| Protein | DPOGS200974-PA | 73 aa |
| Genomic position | DPSCF300147 - 597022-598651 | |
| RNAseq coverage | 145x (Rank: top 54%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | % | |||
| Bombyx | % | |||
| Drosophila | Tfb5-PB | 2e-31 | 87.32% | |
| EBI UniRef50 | UniRef50_B7Z018 | 4e-29 | 87.32% | Tfb5 n=20 Tax=Metazoa RepID=B7Z018_DROME |
| NCBI RefSeq | XP_002021498.1 | 4e-30 | 87.32% | GL26481 [Drosophila persimilis] |
| NCBI nr blastp | gi|195161284 | 1e-28 | 87.32% | GL26481 [Drosophila persimilis] |
| NCBI nr blastx | gi|195161284 | 1e-28 | 87.32% | GL26481 [Drosophila persimilis] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003677 | 3.9e-29 | DNA binding | |
| GO:0006289 | 3.9e-29 | nucleotide-excision repair | ||
| KEGG pathway | dpe:Dper_GL26481 | 1e-29 | ||
| K10845 (TTDA) | maps-> | Nucleotide excision repair | ||
| InterPro domain | [1-70] IPR009400 | 3.9e-29 | Nucleotide excision repair, TFIIH, subunit TTDA | |
| Orthology group | MCL16765 | Patchy | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS200974-TA
ATGGTGAATGTTATGAAAGGTGTTCTTGTGGAATGTGACCCAGCAATGAAGCAGTTCCTACTCCACTTAGATGAAACACTGGCCCTCGGTAGAAAATTTATCCTTCAGGATCTGGATGAAACCCATGTGTTTATTTCATCAGATATAGTTGAAACATTACAAGCTCGTGTTGATGATTTGATGGACCAATTCAGTTTCCCAGTTCACGATAAAGGTTTGTAA
>DPOGS200974-PA
MVNVMKGVLVECDPAMKQFLLHLDETLALGRKFILQDLDETHVFISSDIVETLQARVDDLMDQFSFPVHDKGL-