Monarch geneset OGS2.0

DPOGS201071
TranscriptDPOGS201071-TA4335 bp
ProteinDPOGS201071-PA1444 aa
Genomic positionDPSCF300185 - 245811-266511
RNAseq coverage17x (Rank: top 80%)
Annotation
HeliconiusHMEL0057650.070.63% 
BombyxBGIBMGA007203-TA0.083.07% 
DrosophilaSos-PA8e-3728.76% 
EBI UniRef50UniRef50_UPI0002062AF90.050.07%UPI0002062AF9 related cluster n=1 Tax=unknown RepID=UPI0002062AF9
NCBI RefSeqXP_001952636.10.049.89%PREDICTED: similar to AGAP001238-PA [Acyrthosiphon pisum]
NCBI nr blastpgi|3407171990.054.64%PREDICTED: ras-specific guanine nucleotide-releasing factor 1-like [Bombus terrestris]
NCBI nr blastxgi|3407171990.054.47%PREDICTED: ras-specific guanine nucleotide-releasing factor 1-like [Bombus terrestris]
Group
Gene OntologyGO:00072640small GTPase mediated signal transduction
GO:00056220intracellular
GO:00050850guanyl-nucleotide exchange factor activity
GO:00350232.8e-46regulation of Rho protein signal transduction
GO:00050892.8e-46Rho guanyl-nucleotide exchange factor activity
GO:00055151.1e-20protein binding
GO:00510568.9e-13regulation of small GTPase mediated signal transduction
KEGG pathwayaga:AgaP_AGAP0012380.0 
 K12326 (RASGRF2)maps-> MAPK signaling pathway
InterPro domain[7-1405] IPR0089370Ras guanine nucleotide exchange factor
[665-1402] IPR0235782.5e-109Ras guanine nucleotide exchange factor, domain
[1166-1403] IPR0018954.2e-82Guanine-nucleotide dissociation stimulator CDC25
[314-495] IPR0002192.8e-46Dbl homology (DH) domain
[31-127] IPR0119931.1e-20Pleckstrin homology-type
[28-130] IPR0018496.7e-18Pleckstrin homology domain
[697-754] IPR0006518.9e-13Ras-like guanine nucleotide exchange factor, N-terminal
Orthology groupMCL14619 Patchy
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS201071-TA
ATGTTGAGTCCGAAGATCCAACGCTCAATCCGCGTCAACGACGGCCAGCTGATAGCGTTGTCAGAGAGAGCCCAGTACGACCACTCACAGGCCGGGTACCTTCACAAACGAAGCTCCGACAATACAAAATGGCAGCTACGGTGGTTCATACTGTATCAGAACCTGTTGTTTTATTACGAATCGGAGAACAACACTCGTCCCACTGGTATTCTGTTGCTAGAGGGCTCCTACTGCGAGAGACTTAGCAAAGCGCCGCTTGAGAGGAACGCTTCGTTCTGCTTTACAATATCGTATCGTCGTGAGAGCCAGCGTCAGTACGAGCTGAGAGCCGCGTCTGAGGTAGACTGCTCACACTGGGTCGACGCTATCCGGGAGGCGAGCTTCAACAAGCTGTTGCAGCAGAAAGAGGAGCTGGAACAGAAGCAGCTGCATCTTCTGCAGGTGGTGGAGAGCGAGCGAACCTCTCGCTGGCAGTACGCCCAACAGTGTGACGAACTATCCAACGAGGTCAAGAAACTGAGGACAGAGGTAGGAGTTATTAGCAGCAGGGCGAAGCTGTCTAGCAAGCACAGCTTCAACAAGCTGTTGCAGCAGAAAGAGGAGCTGGAACAGAAGCAGCTGCATCTTCTGCAGGTGGTGGAGAGCGAGCGAACCTCTCGCTGGCAGTACGCCCAACAGTGTGACGAACTATCCAACGAGGTCAAGAAACTGAGGACAGAGTTATGCGCTTACAAGAAGGAACACGAGCCAGCAACGCGAGCGGAATCAACTACTAGCCTTTCACCCACTGACTCCGAGGAGATCGATCCCAACGAGTTGAGGAAGATTAAAAAAGTTCAGAGCTTCTTCCGCGGTTGGCTATGCAGGCGGCGTTGGAAGCAGATTGTCGAACAGTATATCAAAAGTCCTCACGCTGAGAGTATGAGGAAAAGAAATAGTCTGGTCTTCAAGATGGTCGAAGCTGAAGAGGAATATTTGGAACAGATGGAGTGCTTGGTCACCTGCTTTTTAAGGCCTTTCAAAATGGCAGCAAGCTCGAAAAAACCGCCCTGCACTCACGAGGATGTCAACTCTATCTTCCTCAACAGCGAAACTGTGTTGTTTTTACATCAAATATTTTTCAAGGGATTGACTTCCAGGATGGAGTCATGGCCGACGCTCGTTTTAGGAGACCTTTTCGACATGCTGTTGCCGATGTTGACGATCTACCAAGAATACGTGCGGAACCACCACTACTCGCTGCAGGTGCTCACGGAATGCAAACAGAACCAGCCCTTCACGCAGCTTCTAGCACGTCTCGAGAGCAAACCGGCCTGCCAGTCGAGACTGCTGGAGACATTCTTGACGTATCCTATGCATCAGATTCCTAGATACATCATCACTCTGCACGAGTTATTGGCACACACGCCACACGACCACGTGGAGCGGCGCAGCCTACAGCACGCCCGCGCTCAGCTCGAGGAACTGTCCAGACAAATGCATGATGAGGTCAGCGAAACTGAAAATTTGAGGAAGAATCTAGCGGTGGAACGAATGATAATTGAAGGATGTGACATACTGCTGGATGTTAACCAAGTTTTCATTCGACAAGGAACTCTCTCCCAAGTGGTAGGTAAAGGACGGCGAGCAAATTTACAGGCTCGTCAGGCATTTCTGTTCAGTAACCACTTGCTGTTGACGACACGAGCTGCTGGAGGACGTCTTCACCTGCCGCCATCAGGACGTCTCCCGCTACATGACGCACTGCTTATTGAGGACCCCTCAAACCACGAAGATGATGATTCCACATCAGTTTGCTCATCGCCTGGAGGAGATCTCTATCACGGCAAGGACTTTAAAATACTCGTTGAAGTCAAGGGTGAACAAATTTGTGCACATTTAGTTGCAGCGACTTTGGAAGATAAAGCGGCGTGGACAAGCGAGTTGGCCCAGTGTATGGAGAGTGCTGCATTAACTGAACTGTTACGAGCTTGCGGCTCATGCGGTGCAGCATCGGCAAGTCTCCCCGCTTGCAGGTCTGACAGAGCCCTGTTCACTGACGATGTGGATATCAGGTTCAGCAGGACACTGAACTCCTGCAAGGTGCCGCAAATCAGATCGGCAACTCCGGAACGATTGCTGCAAAGATTGACGGATCTGCGTTTCTTATCTGTGGACTTCCTGAACACCTTCTTGTTGACGTACCGCGTCTTCACGGATGGAGTCAAAGTACTAGAGGCTCTGAAGGCGGTGTTTTACGAGCAGTCACAGCAGGAGCTGGAGTTGGCGCCTCCTGATACCACCAGGAAGGCTAGCGGGGCCAGCTCCGTTTCTGGTTATGGATCTGAATATAGCGACCGTGATTGGCAGTCAAGATTTTGGAGAACGTCTAGAAAAAGTGAAGAAGATGATAAATTATCACCGTATCTAATGGCGCCATCGCGACGCACTTCCGCTGTTAAGGCTGAAGAAGATAACAGCCATCTTCAAATACCAAAAATAATGGCCACCTCGTCCAGTAACGAAACACTGAAAGGCACGTCACCATCTTCGCCTGGCGCTTTGAGTTCAGTGACTCTTGTGGGTAGTCCTAACAAAACCAGTCCAGTGGAACCAGCTAAAACTGAGAAAAAGTCACCGACTAAAGACAATGATACAGCAGCTGCTATCATGAAAGTAGAGAGCATTGAGCTCGTCGATCAAAGCGACGAAGACATCAAGTATAAAGAAGAAGAACCTGAGAAGAACAAGCATAAGATTGACGATAAATTTAAAATATCCCAAAGATTTTCAGAAGTTTGCAATCAGCGAGTACGTACCATGTCTGAGAGCCCGCGGCGCCTGCAGCCGGTGGCGGGCGGGGCTGCGTTGGCGGACGCGCGGCGCCGCTCCGAGGGGGCGCGGGAGGTTACTGAGACCGAGCCGAGGAGAGCCTCGGATATCGCCGCTCGAGCACTACCCAGACGGTCTGTCAGTGAGAGACGCTGTACAAACTCATCCATGAACAGCGAGCGTCGTCGGTACTGGGGCGGCTCAGAGCCGAGGACATCTGTCACATCTCAAGTGTCACAGATGCAGAACTACCGCCGTGAAACCAGTCAACCGAAAGCCGGCGTCGTCATCACTTCGTTCAGACAGTCGCACAGAAGGAGCAGCACATCAACTGCGGCAGCAGCATTTGCTGTGGCTACGTCAGCCTCTTCTAACCCGAGATCACCACCGCCTACATCACCGCCACAAAACAGACGCGATTCTGTCATCTCAACTGCGGCTACCATGAGAGTGCTTAATGTATTAAGGCACTGGGTTTCAAAGCATTCTTCGGACTTCTGGTCGGATGAACGTCTCCGAGGTATGACGATGGATTTCCTTAAAGAGATCGAAGGCAGCCCTGGGCTACTGCCGGCTGAGCACAAAGCTGCTGCTCAATTGCTTCGTCTTTTAGAACGCGCCCCGGACAGGGCAGTCGACTTGAAAGCTCTGTTCACCCCATCAAAGATACCGACCAAAGAGAGCATAGAAACATTATCTGCTCTCGAGATCGCCGAGCAGATGACGTACTTGGATTATCAAATATTCAGCGCCATCCACAGCGAGGAGTTCCTGAGCCAAGCCTGGACAAAAGCAGATAAAGCTGAACGAGCTCCCCATATTGTAATGATGACTGGTCATTTCAACCATATCTCTAACCTGGTGATCTCCGAAATCCTGAAGAAATACACTCTTACAGGTCGTGTATCGGCTATCGAAAAATGGGCAGCGGTTGCTGACATTATGCGATGTTTGCACAACTTTAACGGAGTACTCCAAGTGTGTGCGGCTCTCTCTAACACGGCGGTGTACCGTCTCAAGAAGACTTGGGACAAAGTCTCTAAAACTACGAAACAGACTATCGAGAAAATGCAGAATATAATATCATCGGAATGCAGATTTAGAATTCTAAGAGAATCTCTGCACAGATGCGACCCGCCCTGCATTCCGTACTTGGGTATGTATTTATCGGATTTGTCATTCATCGAAGAGGGCACGTCCAATTACACTCCCGATGGACTTCTGAACTTTTCAAAGATGAGAATGATAGCACACGTGATCCGAGAGATCAGAAACTTTCAACAAACGCCGTACAAGATCGACCACATTCCCAAGGTATGCGACTACCTCCTCGAGGAATCCTTCATTATTCCCGAGGAGCGTCAGTTCACCCTCTCCTTGGAGCTGGAGCCGCGAGCCCCCCGTGGGTCCGCCGGTGGGCTGGTGGTGACCCCCACCACGCCCGCCTCTCCCGCCGCTCAACGCCGCCGGCGAGCATCTTTGGCAGCGCTAGCACCTCTTGCGCAACTCCGCAACGATCGCTAG

Protein sequence:

>DPOGS201071-PA
MLSPKIQRSIRVNDGQLIALSERAQYDHSQAGYLHKRSSDNTKWQLRWFILYQNLLFYYESENNTRPTGILLLEGSYCERLSKAPLERNASFCFTISYRRESQRQYELRAASEVDCSHWVDAIREASFNKLLQQKEELEQKQLHLLQVVESERTSRWQYAQQCDELSNEVKKLRTEVGVISSRAKLSSKHSFNKLLQQKEELEQKQLHLLQVVESERTSRWQYAQQCDELSNEVKKLRTELCAYKKEHEPATRAESTTSLSPTDSEEIDPNELRKIKKVQSFFRGWLCRRRWKQIVEQYIKSPHAESMRKRNSLVFKMVEAEEEYLEQMECLVTCFLRPFKMAASSKKPPCTHEDVNSIFLNSETVLFLHQIFFKGLTSRMESWPTLVLGDLFDMLLPMLTIYQEYVRNHHYSLQVLTECKQNQPFTQLLARLESKPACQSRLLETFLTYPMHQIPRYIITLHELLAHTPHDHVERRSLQHARAQLEELSRQMHDEVSETENLRKNLAVERMIIEGCDILLDVNQVFIRQGTLSQVVGKGRRANLQARQAFLFSNHLLLTTRAAGGRLHLPPSGRLPLHDALLIEDPSNHEDDDSTSVCSSPGGDLYHGKDFKILVEVKGEQICAHLVAATLEDKAAWTSELAQCMESAALTELLRACGSCGAASASLPACRSDRALFTDDVDIRFSRTLNSCKVPQIRSATPERLLQRLTDLRFLSVDFLNTFLLTYRVFTDGVKVLEALKAVFYEQSQQELELAPPDTTRKASGASSVSGYGSEYSDRDWQSRFWRTSRKSEEDDKLSPYLMAPSRRTSAVKAEEDNSHLQIPKIMATSSSNETLKGTSPSSPGALSSVTLVGSPNKTSPVEPAKTEKKSPTKDNDTAAAIMKVESIELVDQSDEDIKYKEEEPEKNKHKIDDKFKISQRFSEVCNQRVRTMSESPRRLQPVAGGAALADARRRSEGAREVTETEPRRASDIAARALPRRSVSERRCTNSSMNSERRRYWGGSEPRTSVTSQVSQMQNYRRETSQPKAGVVITSFRQSHRRSSTSTAAAAFAVATSASSNPRSPPPTSPPQNRRDSVISTAATMRVLNVLRHWVSKHSSDFWSDERLRGMTMDFLKEIEGSPGLLPAEHKAAAQLLRLLERAPDRAVDLKALFTPSKIPTKESIETLSALEIAEQMTYLDYQIFSAIHSEEFLSQAWTKADKAERAPHIVMMTGHFNHISNLVISEILKKYTLTGRVSAIEKWAAVADIMRCLHNFNGVLQVCAALSNTAVYRLKKTWDKVSKTTKQTIEKMQNIISSECRFRILRESLHRCDPPCIPYLGMYLSDLSFIEEGTSNYTPDGLLNFSKMRMIAHVIREIRNFQQTPYKIDHIPKVCDYLLEESFIIPEERQFTLSLELEPRAPRGSAGGLVVTPTTPASPAAQRRRRASLAALAPLAQLRNDR-