DPOGS201082 | ||
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Transcript | DPOGS201082-TA | 441 bp |
Protein | DPOGS201082-PA | 146 aa |
Genomic position | DPSCF300185 + 114249-122917 | |
RNAseq coverage | 430x (Rank: top 28%) |
Annotation | ||||
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Heliconius | HMEL004218 | 3e-28 | 58.75% |   |
Bombyx | BGIBMGA006183-TA | 4e-25 | 63.77% |   |
Drosophila | svp-PA | 9e-42 | 90.00% |   |
EBI UniRef50 | UniRef50_Q8T8D3 | 1e-46 | 96.74% | Seven-up beta (Fragment) n=4 Tax=Coelomata RepID=Q8T8D3_BOMMO |
NCBI RefSeq | XP_002424144.1 | 4e-44 | 78.38% | coup transcription factor, putative [Pediculus humanus corporis] |
NCBI nr blastp | gi|14090242 | 8e-49 | 83.76% | seven-up alpha [Bombyx mori] |
NCBI nr blastx | gi|14090242 | 7e-50 | 83.76% | seven-up alpha [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0005634 | 8.1e-38 | nucleus | |
GO:0006355 | 8.1e-38 | regulation of transcription, DNA-dependent | ||
GO:0043565 | 8.1e-38 | sequence-specific DNA binding | ||
GO:0008270 | 8.1e-38 | zinc ion binding | ||
GO:0003700 | 8.1e-38 | sequence-specific DNA binding transcription factor activity | ||
KEGG pathway |   | |||
InterPro domain | [21-92] IPR001628 | 8.1e-38 | Zinc finger, nuclear hormone receptor-type | |
[18-93] IPR013088 | 1.6e-32 | Zinc finger, NHR/GATA-type | ||
Orthology group | MCL21093 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS201082-TA
ACGCCCGCCAGCCAGGCCGCCTCCACGCAGAGCGGCTCCTCCGCCAACGACAAGGGACAGAACGTGGAGTGCGTGGTCTGCGGAGACAAGTCCTCGGGGAAACACTACGGCCAGTTCACGTGCGAGGGATGCAAGTCGTTCTTCAAACGTTCCGTGAGACGGAACTTGACCTACTCCTGCCGCGGTAACAGGAACTGCCCTATCGACCAGCACCACAGAAACCAGTGCCAGTACTGCCGGCTAAGGAAATGTCTCAAGATGGGGATGAGGAGAGAAGAACCCACGAGACTTGTCAAAAACATCATGCCTCCTAAGCTGTTCCCAGGGGCTGCAAATTATGGCAATGTTTGCTTCGGTTATTATTTTTTTGAATGGCAAAGCGCCTTGCATACGCCTATGTCAGACAATGGCGACGTCAAAAGGATCAGTATAGCGTTCTGA
>DPOGS201082-PA
TPASQAASTQSGSSANDKGQNVECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYSCRGNRNCPIDQHHRNQCQYCRLRKCLKMGMRREEPTRLVKNIMPPKLFPGAANYGNVCFGYYFFEWQSALHTPMSDNGDVKRISIAF-