| DPOGS201097 | ||
|---|---|---|
| Transcript | DPOGS201097-TA | 336 bp |
| Protein | DPOGS201097-PA | 111 aa |
| Genomic position | DPSCF300185 + 378528-379043 | |
| RNAseq coverage | 371x (Rank: top 32%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | % | |||
| Bombyx | BGIBMGA007205-TA | 5e-48 | 84.40% | |
| Drosophila | CG1890-PA | 9e-28 | 51.82% | |
| EBI UniRef50 | UniRef50_Q6PEC1 | 2e-30 | 64.36% | Tubulin-specific chaperone A n=31 Tax=Euteleostomi RepID=TBCA_RAT |
| NCBI RefSeq | XP_969241.1 | 7e-38 | 72.48% | PREDICTED: similar to AGAP002130-PA [Tribolium castaneum] |
| NCBI nr blastp | gi|91091982 | 2e-36 | 72.48% | PREDICTED: similar to AGAP002130-PA [Tribolium castaneum] |
| NCBI nr blastx | gi|383863546 | 8e-37 | 72.22% | PREDICTED: tubulin-specific chaperone A-like [Megachile rotundata] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005874 | 5.4e-49 | microtubule | |
| GO:0051082 | 5.4e-49 | unfolded protein binding | ||
| GO:0007021 | 5.4e-49 | tubulin complex assembly | ||
| KEGG pathway | ||||
| InterPro domain | [1-105] IPR004226 | 5.4e-49 | Tubulin binding cofactor A | |
| Orthology group | MCL10501 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS201097-TA
ATGGCAGATCCTCGAATTCGTCAAATAAAGATTAAAACGGGTGTCGTAAAGAGGATTGCTAAAGAAAAAGTAGTTTACGAGAAGGAGGCCGAGCAACAAAAGAATAGAATAGAGAAGTTAAAAGCTGAAGGACAAGACGAGCATACCATAAGAAAACAAGAGGAGGTTTTACAGGAGTCGCTTATGATGGTCCCTGACTGCCAGAGAAGACTGGCGAAAGCATTTGCGGATCTAAAAAGCACTCTCGAAACAGAACAAGATCTAAAAGAAAGCGAAGATTACGCAGCCGCTGAGCAAGTATTAAAGGACGCGGAGTGCCAACTCTCCACAACATAA
>DPOGS201097-PA
MADPRIRQIKIKTGVVKRIAKEKVVYEKEAEQQKNRIEKLKAEGQDEHTIRKQEEVLQESLMMVPDCQRRLAKAFADLKSTLETEQDLKESEDYAAAEQVLKDAECQLSTT-