DPOGS201097 | ||
---|---|---|
Transcript | DPOGS201097-TA | 336 bp |
Protein | DPOGS201097-PA | 111 aa |
Genomic position | DPSCF300185 + 378528-379043 | |
RNAseq coverage | 371x (Rank: top 32%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | % |   | ||
Bombyx | BGIBMGA007205-TA | 5e-48 | 84.40% |   |
Drosophila | CG1890-PA | 9e-28 | 51.82% |   |
EBI UniRef50 | UniRef50_Q6PEC1 | 2e-30 | 64.36% | Tubulin-specific chaperone A n=31 Tax=Euteleostomi RepID=TBCA_RAT |
NCBI RefSeq | XP_969241.1 | 7e-38 | 72.48% | PREDICTED: similar to AGAP002130-PA [Tribolium castaneum] |
NCBI nr blastp | gi|91091982 | 2e-36 | 72.48% | PREDICTED: similar to AGAP002130-PA [Tribolium castaneum] |
NCBI nr blastx | gi|383863546 | 8e-37 | 72.22% | PREDICTED: tubulin-specific chaperone A-like [Megachile rotundata] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0005874 | 5.4e-49 | microtubule | |
GO:0051082 | 5.4e-49 | unfolded protein binding | ||
GO:0007021 | 5.4e-49 | tubulin complex assembly | ||
KEGG pathway |   | |||
InterPro domain | [1-105] IPR004226 | 5.4e-49 | Tubulin binding cofactor A | |
Orthology group | MCL10501 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS201097-TA
ATGGCAGATCCTCGAATTCGTCAAATAAAGATTAAAACGGGTGTCGTAAAGAGGATTGCTAAAGAAAAAGTAGTTTACGAGAAGGAGGCCGAGCAACAAAAGAATAGAATAGAGAAGTTAAAAGCTGAAGGACAAGACGAGCATACCATAAGAAAACAAGAGGAGGTTTTACAGGAGTCGCTTATGATGGTCCCTGACTGCCAGAGAAGACTGGCGAAAGCATTTGCGGATCTAAAAAGCACTCTCGAAACAGAACAAGATCTAAAAGAAAGCGAAGATTACGCAGCCGCTGAGCAAGTATTAAAGGACGCGGAGTGCCAACTCTCCACAACATAA
>DPOGS201097-PA
MADPRIRQIKIKTGVVKRIAKEKVVYEKEAEQQKNRIEKLKAEGQDEHTIRKQEEVLQESLMMVPDCQRRLAKAFADLKSTLETEQDLKESEDYAAAEQVLKDAECQLSTT-