| DPOGS201109 | ||
|---|---|---|
| Transcript | DPOGS201109-TA | 402 bp |
| Protein | DPOGS201109-PA | 133 aa |
| Genomic position | DPSCF300137 - 314492-314893 | |
| RNAseq coverage | 248x (Rank: top 42%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL005976 | 2e-22 | 45.69% | |
| Bombyx | BGIBMGA013676-TA | 4e-18 | 39.29% | |
| Drosophila | % | |||
| EBI UniRef50 | UniRef50_Q6QH49 | 5e-09 | 37.04% | 3' repair exonuclease n=4 Tax=Alphabaculovirus RepID=Q6QH49_NPVAG |
| NCBI RefSeq | XP_969470.1 | 6e-07 | 30.84% | PREDICTED: similar to three prime repair exonuclease 1 [Tribolium castaneum] |
| NCBI nr blastp | gi|96979801 | 6e-10 | 39.51% | v-trex [Antheraea pernyi nucleopolyhedrovirus] |
| NCBI nr blastx | gi|96979801 | 3e-09 | 44.78% | v-trex [Antheraea pernyi nucleopolyhedrovirus] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003676 | 2.4e-07 | nucleic acid binding | |
| KEGG pathway | ||||
| InterPro domain | [51-127] IPR012337 | 2.4e-07 | Ribonuclease H-like | |
| Orthology group | MCL10614 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS201109-TA
ATGGAAGGAAAAGACTCAACCCCAAAACTTGAAGACATAGATCATGAGTCTGACAATTCACAGAACATACAATCCACTAATGAAAGCTCTCCTACATCATCACCTACCAAAGTGTGCCCTGAGACTCCAATTAAAAGAGGTATTAACCGATCAAGAGTCCGAAGGCGATTTCCATGGTCGGATGGGAACAGGCCGAAAGATAAATATAAATTGAAATATATATATGAGAGACTGTTGAATCGGACAGCGGTAAACCCTCATCGTGCTGAAAATGACTGTTTGTTAGCTCTGGAATGTGCTGCAGCTTTGTCAAAACAATTTGTGAAGTGGGTCGACCAAAACAATTGTTTGTTCAGTCGTATACATCCTATGACTGTCGGTGTGCCACTGCATCAAGCATAA
>DPOGS201109-PA
MEGKDSTPKLEDIDHESDNSQNIQSTNESSPTSSPTKVCPETPIKRGINRSRVRRRFPWSDGNRPKDKYKLKYIYERLLNRTAVNPHRAENDCLLALECAAALSKQFVKWVDQNNCLFSRIHPMTVGVPLHQA-