DPOGS201111 | ||
---|---|---|
Transcript | DPOGS201111-TA | 354 bp |
Protein | DPOGS201111-PA | 117 aa |
Genomic position | DPSCF300137 - 218423-219923 | |
RNAseq coverage | 18058x (Rank: top 1%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL017981 | 2e-49 | 82.76% |   |
Bombyx | BGIBMGA013678-TA | 2e-57 | 91.38% |   |
Drosophila | Vha13-PA | 2e-42 | 70.18% |   |
EBI UniRef50 | UniRef50_G6D2P2 | 2e-60 | 100.00% | Vacuolar ATP synthase subunit G n=4 Tax=Arthropoda RepID=G6D2P2_DANPL |
NCBI RefSeq | NP_001040287.1 | 7e-56 | 91.38% | vacuolar ATP synthase subunit G [Bombyx mori] |
NCBI nr blastp | gi|114053231 | 2e-54 | 91.38% | vacuolar ATP synthase subunit G [Bombyx mori] |
NCBI nr blastx | gi|114053231 | 7e-53 | 91.38% | vacuolar ATP synthase subunit G [Bombyx mori] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0016820 | 2.4e-69 | hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | |
GO:0016471 | 2.4e-69 | vacuolar proton-transporting V-type ATPase complex | ||
GO:0015992 | 2.4e-69 | proton transport | ||
KEGG pathway | tca:662804 | 2e-46 |   | |
  | K02152 (ATPeVG, ATP6G1) | maps-> | Collecting duct acid secretion | |
  |   |   | Oxidative phosphorylation | |
  |   |   | Phagosome | |
  |   |   | Vibrio cholerae infection | |
  |   |   | Epithelial cell signaling in Helicobacter pylori infection | |
InterPro domain | [1-118] IPR005124 | 2.4e-69 | Vacuolar (H+)-ATPase G subunit | |
Orthology group | MCL10286 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS201111-TA
ATGGCGAGTCAGACACAGGGGATCCAGCAATTGTTGGCTGCTGAGAAACGCGCAGCAGAAAAAGTCTCTGAGGCCAGGAAGCGAAAAGCAAAACGTCTAAAGCAGGCTAAGGAAGAGGCTCAGGATGAGGTGGAGAAGTACAGACAGGAGCGGGAGAGGCAGTTTAAAGATTTCGAAGCCAAGCACATGGGCACAAGGGAGGGAGTCGCCGCCAAAATTGATGCTGAGACCAGAGTGAAAATCGATGAGATGAACAAATTGGTCCAGATGCAACAGGAAACGGTGATCACAGACATCCTGAATCTTGTGTACGACATCAAGCCGGAACTTCACGTCAACTACCGCTTAGAATAA
>DPOGS201111-PA
MASQTQGIQQLLAAEKRAAEKVSEARKRKAKRLKQAKEEAQDEVEKYRQERERQFKDFEAKHMGTREGVAAKIDAETRVKIDEMNKLVQMQQETVITDILNLVYDIKPELHVNYRLE-