| DPOGS201179 | ||
|---|---|---|
| Transcript | DPOGS201179-TA | 750 bp |
| Protein | DPOGS201179-PA | 249 aa |
| Genomic position | DPSCF300262 - 75252-78875 | |
| RNAseq coverage | 196x (Rank: top 47%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL018018 | 5e-95 | 68.95% | |
| Bombyx | BGIBMGA014268-TA | 4e-77 | 60.28% | |
| Drosophila | fd64A-PA | 2e-09 | 37.97% | |
| EBI UniRef50 | UniRef50_Q9UPW0 | 1e-12 | 57.38% | Forkhead box protein J3 n=50 Tax=Euteleostomi RepID=FOXJ3_HUMAN |
| NCBI RefSeq | NP_001073017.1 | 1e-12 | 63.27% | forkhead transcription factor J2 [Strongylocentrotus purpuratus] |
| NCBI nr blastp | gi|158518470 | 3e-12 | 59.02% | forkhead box J3 [Xenopus (Silurana) tropicalis] |
| NCBI nr blastx | gi|359064291 | 2e-12 | 41.51% | PREDICTED: forkhead box protein J3 [Bos taurus] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0006355 | 2e-14 | regulation of transcription, DNA-dependent | |
| GO:0043565 | 2e-14 | sequence-specific DNA binding | ||
| GO:0003700 | 2e-14 | sequence-specific DNA binding transcription factor activity | ||
| KEGG pathway | ||||
| InterPro domain | [49-105] IPR011991 | 1.8e-17 | Winged helix-turn-helix transcription repressor DNA-binding | |
| [61-106] IPR001766 | 2e-14 | Transcription factor, fork head | ||
| Orthology group | MCL26186 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS201179-TA
ATGAGCGATTCGCCAGGAGTAGAGTGGCTCCCGGCGTACAGCCCAGGACCACCGCGGCACAGCCCCCTTGGTCCAATTCCTCGCTTTCTTTATGAAGATGTACAACCGCCACTATTACAACAGGAAAATAACAACAAGGAAATTGACCAGAAACAAGACAAAAATAAAATCAAACACGCCAAACCTGCTTATAGCTATGCGAGTATGATTAGATTGGCTATCAGCAGCTCGCCCAATGGAAAGATGACGTTGAATGAGATATACAACTACATCTGCAACGCCTTCCCCTATTACAAGGAGGCTGGCAAGGGCTGGATGATGGCGCCCTACAGTCCAGAGTGTAGTTCAAACAGTTCAGGAGAGGCCGGCGCGTCTGGAGTGGACGCCGCGCCGACGCCGCCCGCTACGCCCACGACGCCCACCGCGCCCACCACACCCACGACGACCACCGTCCTCAAAGAGGAGCCACTGGTCAAAGGGGAACCCAACTTGGAACACACTGACGACGCGCTGTCCGCCCTCATGGACGACGAGCTCATCACGGACGCCGACATCAGCAGAGAGAGCTGGTGGTGGTCGGGTGCGAGGCGGCACGTTTGTGTGGTGAGACACAGCGCCCTCACCGACGACTACGGCAACTTCCTGGACCTGCGTCACCACTGCGACTGTCCTCCGGACACACCGGACACCGCCGACCTCGCCGCGCAGGCGCCCACGACCGCGCTCACCCCGCCCTGGCACGCCTTATAA
>DPOGS201179-PA
MSDSPGVEWLPAYSPGPPRHSPLGPIPRFLYEDVQPPLLQQENNNKEIDQKQDKNKIKHAKPAYSYASMIRLAISSSPNGKMTLNEIYNYICNAFPYYKEAGKGWMMAPYSPECSSNSSGEAGASGVDAAPTPPATPTTPTAPTTPTTTTVLKEEPLVKGEPNLEHTDDALSALMDDELITDADISRESWWWSGARRHVCVVRHSALTDDYGNFLDLRHHCDCPPDTPDTADLAAQAPTTALTPPWHAL-