| DPOGS201237 | ||
|---|---|---|
| Transcript | DPOGS201237-TA | 933 bp |
| Protein | DPOGS201237-PA | 310 aa |
| Genomic position | DPSCF300037 - 154604-161614 | |
| RNAseq coverage | 8x (Rank: top 85%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL015396 | 4e-16 | 38.03% | |
| Bombyx | BGIBMGA012499-TA | 5e-63 | 87.80% | |
| Drosophila | lms-PA | 7e-18 | 56.00% | |
| EBI UniRef50 | UniRef50_D6WAI4 | 7e-43 | 42.27% | Putative uncharacterized protein n=1 Tax=Tribolium castaneum RepID=D6WAI4_TRICA |
| NCBI RefSeq | XP_974114.1 | 1e-43 | 42.27% | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] |
| NCBI nr blastp | gi|91077640 | 3e-42 | 42.27% | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] |
| NCBI nr blastx | gi|91077640 | 1e-41 | 41.72% | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0006355 | 6.9e-23 | regulation of transcription, DNA-dependent | |
| GO:0043565 | 6.9e-23 | sequence-specific DNA binding | ||
| GO:0003700 | 6.9e-23 | sequence-specific DNA binding transcription factor activity | ||
| GO:0003677 | 5.2e-21 | DNA binding | ||
| GO:0005515 | 8.1e-21 | protein binding | ||
| GO:0005634 | 1e-05 | nucleus | ||
| KEGG pathway | ||||
| InterPro domain | [201-263] IPR001356 | 6.9e-23 | Homeobox | |
| [190-259] IPR012287 | 5.2e-21 | Homeodomain-related | ||
| [200-274] IPR009057 | 8.1e-21 | Homeodomain-like | ||
| [223-234] IPR020479 | 1.8e-06 | Homeobox, eukaryotic | ||
| [230-239] IPR000047 | 1e-05 | Helix-turn-helix motif, lambda-like repressor | ||
| Orthology group | MCL17878 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS201237-TA
ATGAACTCTATAGATTATATATCTAGCACGTGTGAGAATGATACAGGGAAGTTTGATAATAATGTCAGTGTCACGAATGATTTGACGGAGGAACGTACAGAGATACGGACATTCGTGGAATCGGATTCCGATTTGGACAGTGAAAATGAAACCGTCGATGTCATATGTGAGAACAGTGAACAAATGAATAGTATTAATTACAATACAATAGCTTACGGCTCCGTCGATAGTATTATATACAGCAAAAACTTATACGCTAACAAAATGACGGTGAAAAAGAAACGGGTTTGTGATAGTGAACAAATTAAAATTATAAACGATTCCGCAAACAGTTTATTACAGGCGAAGGGGAAAAACTTTCTGATAGACAGTATACTAGGCAACGACGAGAGTAAAACTCAAAGAAAACTCGTCAAAGACGCCGATAACCCAGAGGAGACGGGAGACGAACATAATGTGTCATCAACCTCAACATGTCCGGACATCTCCATCAACAGTGCTGATGTCTTGGCGGGACATGCGTACGCGCATTGGCTGGCGACACAACAACCTACTTTTTATGATGACAAAAATAATCGGAGGCAGAAACGTTCCGGACCAGAGAGGAAACCTCGACAAGCATACAGCGCTAAACAACTAGAGAGACTCGAATCTGAATTTAAGTTGGACAAATATCTGAGCGTATCAAAAAGATTGGAGCTCTCCAAGGCGCTCGGACTCACTGAGGTTCAAATAAAAACGTGGTTTCAAAATCGAAGGACAAAATGGAAGAAACAACTCACATCTCGTCTCAAGATCGCCCAGCGTCAGGGATTATTTCCCGGACATATCTTCGGACACGCCCCTCAGACTTATTCACTTATAAATCCTTATACCTACAGTCCATTAAGCTGCATGTTCACCCCCGTGACGTTGCCGACGTCGCAACCATGA
>DPOGS201237-PA
MNSIDYISSTCENDTGKFDNNVSVTNDLTEERTEIRTFVESDSDLDSENETVDVICENSEQMNSINYNTIAYGSVDSIIYSKNLYANKMTVKKKRVCDSEQIKIINDSANSLLQAKGKNFLIDSILGNDESKTQRKLVKDADNPEETGDEHNVSSTSTCPDISINSADVLAGHAYAHWLATQQPTFYDDKNNRRQKRSGPERKPRQAYSAKQLERLESEFKLDKYLSVSKRLELSKALGLTEVQIKTWFQNRRTKWKKQLTSRLKIAQRQGLFPGHIFGHAPQTYSLINPYTYSPLSCMFTPVTLPTSQP-