DPOGS201291 | ||
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Transcript | DPOGS201291-TA | 534 bp |
Protein | DPOGS201291-PA | 177 aa |
Genomic position | DPSCF300176 - 460487-461966 | |
RNAseq coverage | 582x (Rank: top 22%) |
Annotation | ||||
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Heliconius | HMEL012410 | 3e-99 | 94.35% |   |
Bombyx | BGIBMGA003040-TA | 1e-83 | 88.61% |   |
Drosophila | % |   | ||
EBI UniRef50 | UniRef50_UPI0002246587 | 6e-26 | 36.09% | UPI0002246587 related cluster n=1 Tax=unknown RepID=UPI0002246587 |
NCBI RefSeq | XP_001608134.1 | 1e-26 | 36.09% | PREDICTED: similar to ENSANGP00000028549 [Nasonia vitripennis] |
NCBI nr blastp | gi|328711820 | 7e-27 | 44.37% | PREDICTED: hypothetical protein LOC100569183 [Acyrthosiphon pisum] |
NCBI nr blastx | gi|328711820 | 3e-26 | 44.37% | PREDICTED: hypothetical protein LOC100569183 [Acyrthosiphon pisum] |
Group | ||||
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Gene Ontology | GO:0005515 | 1e-12 | protein binding | |
GO:0003677 | 3.3e-11 | DNA binding | ||
KEGG pathway |   | |||
InterPro domain | [20-82] IPR009057 | 1e-12 | Homeodomain-like | |
[27-62] IPR007889 | 3.3e-11 | Helix-turn-helix, Psq | ||
[87-150] IPR006600 | 1.6e-06 | Pogo transposase / Cenp-B / PDC2, DNA-binding HTH domain | ||
Orthology group | MCL20678 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS201291-TA
ATGCGGTGTGCGGTCGCCAACACGGTTACGACAGTCATGGTAAGGAAATACGAAAGAATGAGCGGACGCCAATCCTGGAGTGAAGAAGAAATGGCCAAAGCTGTGGCAGCCGTGGTGTCTGGCAAAATGGGCTACAAACTGGCAGCACGGACGTACCACATACCACGATCAACACTCCAGAGAAGAGCGAGCAAAGTACGATACCAGCAACCAGACGATCCCAAACCCATGATGGGGCATTATAGACGTGTGTTCACTGAGAGTCAAGAGAAAGACTTGGTTGGCTATATAAAGAGCATGGAGAAATATTTCATGGGAGTATCCCGGAGGGATATTAGGGAGCTGGCATTCCAATACGCCGAAGACAACAATCTAAACCATCCCTTCGACGCTAACACTCGGATGGCCGGCGAGGATTGGGTGAGGAACTTCTTAAAGCGGAATCCAGAACTGCTCCACAAATCAGAAAAAGACTACGAGTTGGAACCGGTGAACTTCGATCAGTTCTACCACTTCATGTGTCAATCTTCATGA
>DPOGS201291-PA
MRCAVANTVTTVMVRKYERMSGRQSWSEEEMAKAVAAVVSGKMGYKLAARTYHIPRSTLQRRASKVRYQQPDDPKPMMGHYRRVFTESQEKDLVGYIKSMEKYFMGVSRRDIRELAFQYAEDNNLNHPFDANTRMAGEDWVRNFLKRNPELLHKSEKDYELEPVNFDQFYHFMCQSS-