| DPOGS201311 | ||
|---|---|---|
| Transcript | DPOGS201311-TA | 696 bp |
| Protein | DPOGS201311-PA | 231 aa |
| Genomic position | DPSCF300176 + 198327-199825 | |
| RNAseq coverage | 85x (Rank: top 63%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL017258 | 7e-33 | 32.47% | |
| Bombyx | BGIBMGA003104-TA | 2e-34 | 33.61% | |
| Drosophila | CG8299-PA | 2e-20 | 29.18% | |
| EBI UniRef50 | UniRef50_E1ZZV4 | 9e-22 | 31.30% | Putative trypsin-6 n=3 Tax=Formicidae RepID=E1ZZV4_CAMFO |
| NCBI RefSeq | XP_001995016.1 | 5e-20 | 29.36% | GH22870 [Drosophila grimshawi] |
| NCBI nr blastp | gi|307188529 | 3e-21 | 31.30% | Putative trypsin-6 [Camponotus floridanus] |
| NCBI nr blastx | gi|307188529 | 3e-21 | 31.30% | Putative trypsin-6 [Camponotus floridanus] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003824 | 2.5e-44 | catalytic activity | |
| GO:0004252 | 5.2e-33 | serine-type endopeptidase activity | ||
| GO:0006508 | 5.2e-33 | proteolysis | ||
| KEGG pathway | ||||
| InterPro domain | [2-225] IPR009003 | 2.5e-44 | Peptidase cysteine/serine, trypsin-like | |
| [6-221] IPR001254 | 5.2e-33 | Peptidase S1/S6, chymotrypsin/Hap | ||
| [33-48] IPR001314 | 9.8e-07 | Peptidase S1A, chymotrypsin-type | ||
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS201311-TA
ATGGTGGGTTTTGTAGTGGGGGGTGATTATATAGACATAAAAAAATATCCACACTCAAATATGATGTATATAAATTGTACTACCACATATCTTTGCGGCGGTTCTTTCATCAATGATCGTGTCGTACTGACTGCCGCTCATTGCCTCTATCTGTGCGTTGATCCGACCAGAGACATTGTAATTCTTAATTATGGACACTCTTCTATAGAAAAAATGAAACACTTAAAAGTTCGTAAATTCTTAGTACATCACAAATACTGCGACACCTCTCTGGTAAATGACATCGGTTTGACATATTCAAACGCACCGGTAAAGTTTGGGGCGAACGTGAAGCGTGTTGCGCTGCTGAGTATATTTCCAAGACGAGCAACTCACGGTTACGTTACAGGATGGGGATTGGTTAATACAGACCCTGAAGAACTAGCTACGTCCATGAAATATGTTCAACAAGACATAATAAAACCCAAAGAATGCAGTCGTGGAAACGTGCCTGCTGGAATCTTCTGTGGCCAATCCATGAATGATGGGGAAAATCCAGAAATGGGTGATTCTGGAGGTGCCTTTGTGGTTTACAAATATATCCAAATAGGCATAGTCTCGTACATGTTACCGAAAAACAATATCGTTGCTTATACAAACACTACGTATCATTACCATTGGATAAAATCCAAGACATTGGAACTCCTATGCCGTTAA
>DPOGS201311-PA
MVGFVVGGDYIDIKKYPHSNMMYINCTTTYLCGGSFINDRVVLTAAHCLYLCVDPTRDIVILNYGHSSIEKMKHLKVRKFLVHHKYCDTSLVNDIGLTYSNAPVKFGANVKRVALLSIFPRRATHGYVTGWGLVNTDPEELATSMKYVQQDIIKPKECSRGNVPAGIFCGQSMNDGENPEMGDSGGAFVVYKYIQIGIVSYMLPKNNIVAYTNTTYHYHWIKSKTLELLCR-