| DPOGS201347 | ||
|---|---|---|
| Transcript | DPOGS201347-TA | 798 bp |
| Protein | DPOGS201347-PA | 265 aa |
| Genomic position | DPSCF300176 + 799190-802402 | |
| RNAseq coverage | 974x (Rank: top 13%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL012386 | 8e-142 | 85.66% | |
| Bombyx | BGIBMGA003132-TA | 9e-114 | 66.79% | |
| Drosophila | CG10026-PB | 8e-71 | 47.56% | |
| EBI UniRef50 | UniRef50_D6WK77 | 6e-81 | 53.25% | Putative uncharacterized protein n=1 Tax=Tribolium castaneum RepID=D6WK77_TRICA |
| NCBI RefSeq | XP_001606243.1 | 1e-84 | 55.20% | PREDICTED: similar to CRAL/TRIO domain-containing protein [Nasonia vitripennis] |
| NCBI nr blastp | gi|345494155 | 1e-83 | 55.20% | PREDICTED: alpha-tocopherol transfer protein-like isoform 1 [Nasonia vitripennis] |
| NCBI nr blastx | gi|345494155 | 8e-83 | 55.20% | PREDICTED: alpha-tocopherol transfer protein-like isoform 1 [Nasonia vitripennis] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0006810 | 1.7e-27 | transport | |
| GO:0005622 | 1.7e-27 | intracellular | ||
| GO:0005215 | 1.7e-27 | transporter activity | ||
| KEGG pathway | ||||
| InterPro domain | [57-237] IPR001251 | 6.1e-45 | Cellular retinaldehyde-binding/triple function, C-terminal | |
| [17-39] IPR001071 | 1.7e-27 | Cellular retinaldehyde binding/alpha-tocopherol transport | ||
| [1-56] IPR011074 | 7e-12 | Phosphatidylinositol transfer protein-like, N-terminal | ||
| [7-39] IPR008273 | 1.9e-06 | Cellular retinaldehyde-binding/triple function, N-terminal | ||
| Orthology group | MCL12295 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS201347-TA
ATGATATACGAGCGGGGTGAATGCACTCCAAAACGCATGGACGATGAATACCTGCTTAGGTTTTTACGAGCTCGGAATTTTATCCCGCAAAGAGCGCACAGACTGATGGTGAATTATCACCAGTTCAAAGAAGACAATCCAGAGTTATTCGAGAACGTATATCCCCTGGATTTACGGAGGATTGGAGACACCAACGTCATGGCTGTACCGCCATATCGTGATCAAAATGGTCGCAGACTTTTGCTTTATAGAATTGGATCCTGGGACCCCAAATCTGTTGCTGTGGAAGATATGCTGAAGGCGACAATATTCGCCTTGGAGCTCGGATTGTTGGAGCAGCGAACCCAAATTCTGGGTGGAATAGCTTTGTTTGATTTGGAAGATTTAGGTACACAGCATTTGTGGCAGGTCACGCCGTCGGTTGCGAGCAAAATTATTAAACTTTTAGTCTCAAGTTTTCCCGCAACCACTCACGCCATACATATAATTAACCATTCTTGGATATTCGATAAAATGTACAGCATATTCAAACCGCTACTGACAGCGCAAATGCGCTCGAGAATCTTCTTCCACGGATATGACGTCACATCCCTTCACGAGCACATCCAGCCGGACTACCTTCCGGAACGGTATGGTGGTGTATGGCCCGACTATCCGTATACCATCTGGCTCGAATCTTTGAAGAAAAATTACACCGTTGCCAAACAGGTACTGGCGCTCGGGTATAAGTTCCGCGAAGAGGAGGTTTGTCCCGAAGTCGTTAGAAGACTAAAGGAGGAAGGTATAAAATTATCGTGA
>DPOGS201347-PA
MIYERGECTPKRMDDEYLLRFLRARNFIPQRAHRLMVNYHQFKEDNPELFENVYPLDLRRIGDTNVMAVPPYRDQNGRRLLLYRIGSWDPKSVAVEDMLKATIFALELGLLEQRTQILGGIALFDLEDLGTQHLWQVTPSVASKIIKLLVSSFPATTHAIHIINHSWIFDKMYSIFKPLLTAQMRSRIFFHGYDVTSLHEHIQPDYLPERYGGVWPDYPYTIWLESLKKNYTVAKQVLALGYKFREEEVCPEVVRRLKEEGIKLS-