DPOGS201350 | ||
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Transcript | DPOGS201350-TA | 468 bp |
Protein | DPOGS201350-PA | 155 aa |
Genomic position | DPSCF300176 + 846006-848213 | |
RNAseq coverage | 43x (Rank: top 72%) |
Annotation | ||||
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Heliconius | HMEL012384 | 9e-75 | 95.04% |   |
Bombyx | BGIBMGA003134-TA | 4e-73 | 92.91% |   |
Drosophila | Oli-PB | 3e-40 | 57.99% |   |
EBI UniRef50 | UniRef50_D6WP00 | 5e-48 | 68.49% | Putative uncharacterized protein n=1 Tax=Tribolium castaneum RepID=D6WP00_TRICA |
NCBI RefSeq | XP_974793.1 | 1e-48 | 68.49% | PREDICTED: similar to Olig family CG5545-PA [Tribolium castaneum] |
NCBI nr blastp | gi|91083927 | 2e-47 | 68.49% | PREDICTED: similar to Olig family CG5545-PA [Tribolium castaneum] |
NCBI nr blastx | gi|91083927 | 3e-47 | 68.67% | PREDICTED: similar to Olig family CG5545-PA [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0005634 | 9e-16 | nucleus | |
GO:0006355 | 9e-16 | regulation of transcription, DNA-dependent | ||
KEGG pathway |   | |||
InterPro domain | [47-104] IPR011598 | 9e-16 | Helix-loop-helix DNA-binding | |
[51-105] IPR001092 | 2.1e-15 | Helix-loop-helix DNA-binding domain | ||
Orthology group | MCL16364 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS201350-TA
ATGCAAGGAGGCCAGCCTCCGCCTCCGCAGCACTGCTATCCGACTGATGAAAACCAACCAGAACCCGGCACGAGCTACGCTCAAAGACCCCTCGGCGATGGTAAATCGAAACAGAAAATGCGTCAAGGCAAAAATGTGAGATTGAACATCAATGCAAGAGAAAGACGAAGAATGCACGATCTGAATGACGCTTTAGACGAACTACGAGGAGTGATACCGTACGCACACTCGCCGTCCGTGAGGAAGTTGTCCAAAATAGCTACCCTCCTGCTGGCTAAGAATTATATTCTGATGCAGGCGAGTGCCCTGGAGGAATTGCGACGGCTAGTTGCATATCTCCAAGGCACCGCTACAGCCGCTGGTATCGTTCCACCGCCAGGATTCGACCTAGCCGGCATGCCAGCCACCGCCAAGCTTCTTCAGGGACCGCAACCGGGACCACCAACCGCGCCCGACCCTCCATCTTGA
>DPOGS201350-PA
MQGGQPPPPQHCYPTDENQPEPGTSYAQRPLGDGKSKQKMRQGKNVRLNINARERRRMHDLNDALDELRGVIPYAHSPSVRKLSKIATLLLAKNYILMQASALEELRRLVAYLQGTATAAGIVPPPGFDLAGMPATAKLLQGPQPGPPTAPDPPS-