DPOGS201380 | ||
---|---|---|
Transcript | DPOGS201380-TA | 375 bp |
Protein | DPOGS201380-PA | 124 aa |
Genomic position | DPSCF300083 + 119378-119752 | |
RNAseq coverage | 758x (Rank: top 17%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL008466 | 5e-52 | 79.51% |   |
Bombyx | BGIBMGA000694-TA | 7e-29 | 50.83% |   |
Drosophila | CG13993-PA | 6e-22 | 42.74% |   |
EBI UniRef50 | UniRef50_E0W2Q3 | 2e-24 | 47.50% | Prefoldin subunit, putative n=1 Tax=Pediculus humanus corporis RepID=E0W2Q3_PEDHC |
NCBI RefSeq | XP_002432647.1 | 3e-25 | 47.50% | prefoldin subunit, putative [Pediculus humanus corporis] |
NCBI nr blastp | gi|321472274 | 2e-28 | 54.92% | hypothetical protein DAPPUDRAFT_100476 [Daphnia pulex] |
NCBI nr blastx | gi|321472274 | 2e-28 | 55.56% | hypothetical protein DAPPUDRAFT_100476 [Daphnia pulex] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0016272 | 4.7e-19 | prefoldin complex | |
GO:0006457 | 4.7e-19 | protein folding | ||
GO:0051082 | 4.7e-19 | unfolded protein binding | ||
KEGG pathway |   | |||
InterPro domain | [11-117] IPR009053 | 2.3e-21 | Prefoldin | |
[15-119] IPR002777 | 4.7e-19 | Prefoldin beta-like | ||
Orthology group | MCL13073 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS201380-TA
ATGACGAAACCAATAGATTTAGAATTAAAGAAGGCTTTTTTAGAATTACAAGTGAAAATGGTCGAGACAAGCAAAAAAATCCAAATGATTGATGTCCAAATTGGTGTAATGAAGAGAGTTTTACATCACGCAGATGTTACTCAACAAGAAATAAGTACTTTACCACCTGAAACAAAAACTTATGAGTCTGTGGGGAGAATGTTCCTTTTAACTGATTTGAAAGAAATAAAACAGAACCTTGAGAACAGAATAGCAGTATTATCGGTTCGTACAGACGAATTAGTAGAAAGTAAACAGTTTTTAGAAATGAATCTCCAAGAAAGTGAAGACAACATTAGGGAGATGGTGCAACAACGGAAGGAACAGGGTGATTAG
>DPOGS201380-PA
MTKPIDLELKKAFLELQVKMVETSKKIQMIDVQIGVMKRVLHHADVTQQEISTLPPETKTYESVGRMFLLTDLKEIKQNLENRIAVLSVRTDELVESKQFLEMNLQESEDNIREMVQQRKEQGD-