| DPOGS201405 | ||
|---|---|---|
| Transcript | DPOGS201405-TA | 456 bp |
| Protein | DPOGS201405-PA | 151 aa |
| Genomic position | DPSCF300006 - 1901030-1901485 | |
| RNAseq coverage | 1952x (Rank: top 6%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL006981 | 9e-86 | 100.00% | |
| Bombyx | BGIBMGA002559-TA | 3e-85 | 99.34% | |
| Drosophila | ben-PA | 2e-79 | 89.40% | |
| EBI UniRef50 | UniRef50_P35128 | 2e-77 | 89.40% | Ubiquitin-conjugating enzyme E2 N n=372 Tax=root RepID=UBE2N_DROME |
| NCBI RefSeq | NP_001040393.1 | 9e-84 | 99.34% | ubiquitin conjugating enzyme E2 [Bombyx mori] |
| NCBI nr blastp | gi|114051115 | 2e-82 | 99.34% | ubiquitin conjugating enzyme E2 [Bombyx mori] |
| NCBI nr blastx | gi|114051115 | 1e-81 | 99.34% | ubiquitin conjugating enzyme E2 [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0016881 | 6.2e-48 | acid-amino acid ligase activity | |
| KEGG pathway | tca:657832 | 2e-82 | ||
| K10580 (UBE2N, BLU, UBC13) | maps-> | Ubiquitin mediated proteolysis | ||
| InterPro domain | [6-149] IPR016135 | 1.1e-64 | Ubiquitin-conjugating enzyme/RWD-like | |
| [7-142] IPR000608 | 6.2e-48 | Ubiquitin-conjugating enzyme, E2 | ||
| Orthology group | MCL12228 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS201405-TA
ATGGCAGCCCTACCACGTAGAATAATCAAAGAGACACAACGGTTGATGCAAGAACCCGTGCCGGGAATTAGCGCGGTGCCTAGCGAGAACAATGCTCGTTATTTTCACGTAATAGTCACCGGGCCAGAAGACTCGCCGTTCGAGGGAGGACTTTTCAAATTAGAACTATTCCTACCAGAGGACTACCCTATGTCAGCGCCTAAGGTTAGGTTTATTACGAAAATTTACCATCCGAATATAGATCGGCTAGGTCGCATATGTCTGGATATTCTGAAAGACAAATGGAGCCCGGCATTGCAGATTCGCACCGTTCTGCTTTCTATTCAAGCTTTATTATCGGCACCTAACCCCGACGACCCGCTGGCGAACGATGTGGCCGAACTGTGGAAAGTAAATGAGAGCGAAGCCATCCGAAACGCGAAGGAGTGGACCAGGAGATATGCAATGGACAACTGA
>DPOGS201405-PA
MAALPRRIIKETQRLMQEPVPGISAVPSENNARYFHVIVTGPEDSPFEGGLFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRNAKEWTRRYAMDN-