| DPOGS201423 | ||
|---|---|---|
| Transcript | DPOGS201423-TA | 2094 bp |
| Protein | DPOGS201423-PA | 697 aa |
| Genomic position | DPSCF300006 - 1613534-1619875 | |
| RNAseq coverage | 222x (Rank: top 45%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL009067 | 0.0 | 55.62% | |
| Bombyx | BGIBMGA002716-TA | 0.0 | 56.86% | |
| Drosophila | CG5009-PA | 1e-177 | 45.68% | |
| EBI UniRef50 | UniRef50_D3TSF3 | 0.0 | 47.86% | Acyl-coenzyme A oxidase n=12 Tax=Endopterygota RepID=D3TSF3_GLOMM |
| NCBI RefSeq | XP_973660.1 | 0.0 | 52.02% | PREDICTED: similar to acyl-CoA oxidase [Tribolium castaneum] |
| NCBI nr blastp | gi|91082769 | 0.0 | 52.02% | PREDICTED: similar to acyl-CoA oxidase [Tribolium castaneum] |
| NCBI nr blastx | gi|91082769 | 0.0 | 52.02% | PREDICTED: similar to acyl-CoA oxidase [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003997 | 2.7e-242 | acyl-CoA oxidase activity | |
| GO:0006631 | 2.7e-242 | fatty acid metabolic process | ||
| GO:0050660 | 2.7e-242 | flavin adenine dinucleotide binding | ||
| GO:0005777 | 2.7e-242 | peroxisome | ||
| GO:0055114 | 2.7e-242 | oxidation-reduction process | ||
| GO:0016627 | 4.7e-50 | oxidoreductase activity, acting on the CH-CH group of donors | ||
| GO:0008152 | 2.8e-46 | metabolic process | ||
| GO:0006635 | 2.1e-43 | fatty acid beta-oxidation | ||
| GO:0003995 | 7e-41 | acyl-CoA dehydrogenase activity | ||
| KEGG pathway | tca:662475 | 0.0 | ||
| K00232 (E1.3.3.6, ACOX1, ACOX3) | maps-> | Peroxisome | ||
| Fatty acid metabolism | ||||
| Biosynthesis of unsaturated fatty acids | ||||
| PPAR signaling pathway | ||||
| alpha-Linolenic acid metabolism | ||||
| InterPro domain | [2-697] IPR012258 | 2.7e-242 | Acyl-CoA oxidase | |
| [1-632] IPR023570 | 2.6e-201 | Acyl-CoA oxidase, peroxisomal | ||
| [295-458] IPR009075 | 4.7e-50 | Acyl-CoA dehydrogenase/oxidase C-terminal | ||
| [6-283] IPR009100 | 2.8e-46 | Acyl-CoA dehydrogenase/oxidase | ||
| [483-651] IPR002655 | 2.1e-43 | Acyl-CoA oxidase, C-terminal | ||
| [148-277] IPR006091 | 7e-41 | Acyl-CoA oxidase/dehydrogenase, central domain | ||
| [20-147] IPR013786 | 2.3e-25 | Acyl-CoA dehydrogenase/oxidase, N-terminal | ||
| Orthology group | MCL10144 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS201423-TA
ATGTCGACGATTACAGAGAACGAGGATTTAAGAAAAGAGAGAGCAAAATGCACGTTCAATATAGAAGAACTGACTTATTTGTTAGACGACGGATACGAAAACACTAGACGAAGAAGGGATTTAGAAAATAAAGTTCTCAGTACGAAGGGTCTCTTGGATGAGATACCAGAAGAATATCTCAGTCACAAGGAGAAATATGAAAACGTGATACGAAAATGTGTAAAATTGCATCGAGCCCTTTTAGAGTATGATGATCTGAGAGACAAACCTATTGATGAAAAGATTAAAGCAATTCTTCGTGACACGGTATCATTAGCTGTCACGAAAGACAACTCCCCGATGATGCTCCATTCGGGCATGTTCTTGATGGCAATTGAAGGACAGGCAAATGAGAAACAACAGGAATATTGGCTTAAAAGGGGAAGAAATATGGAAATTATAGGGACTTATGCTCAGACTGAATTGGGCCATGGGACCTTTTTGAGAGGTTTAGAATTACGAGCAACTTATGATGAAAAAACTGAAGAATTTATTTTGCACAGTCCGACCTTAACTTCTTATAAGTGGTGGCCTGGAGGATTGGCTCACACAGCAAATTACGCTATTGTTATGGCACAACTTTATATAAAGGACAAGTGCTATGGCATGCAACCTTTTATGGTACAGCTAAGGGATGAAGAAACACACATGCCTCTCCCGGGGATAAAGGTTGGGGAAATTGGACCTAAACTGGGTTTTAACACAGTCAACAATGGATTCCTTGGTTTTGAAAATGTGAGAATACCAAGGGACAGAATGCTCATGAAAAATGCGCAAGTATTGAAGGATGGAACATTTATAGCGTCCCCAAACAGCAAATTAACGTACAATACGATGGTGAATGTCCGTGTGCTGATCGTGAATACAGTCGCCAAGTATTTGTCGTCAGCATCTACCATCGCCGTACGATATGCTGCTGTCAGGAGACAATCACAAATGAAACCTGGTGAACCGGAACCCCAAATCTTGGACTACGTGACGCAGCAACACAAGCTGATGATCGCTATCGCTACCAGCCACGCATATCATTTTACAGTTCGTTGGCTCTACGACGTGTCTGACACTGTTAAAGAGAACATCACTAAGGGTCAACTGGATACATTGCCTGAGCTGCACGTGCTGGCCTGCGCTCTGAAAGTGTTGAGCTCGTCGGAGTGTACTTCCCTGGTGGAAGTCTGTCGTCGGGCTTGCGGCGGTCACGGGTACATGCTGTCTTCCAACCTGCCGCAGCTGTATGGAGTATGCACTGCGACCATGACTTACGAGGGAGAGAATACAGTGCTATTGTTACAAGTAGCCAGGTCTCTTGTGAAAGCTTGGGACCGAGCCGCTAGGGGTCAACCTTTGAGTCCATCAATGTCTTACATTGAAAACAAAACATTAGCAGCCAAATGGGACGCTTCACTTGATGGAATAGTTAGAAATTTCCAGATTGTATCTAGAAGCAAACTGGCATCGAGCGTGGCAAGTTTTCAACAGTACATGAAGTCTGGTTTATCTTACGAAGATGCCTGGAACAAAGCTTCGGTACAACTGATCGCTGCGGCTGAGGCACATGGCAGGGCTATAGTTTTAGCGATATACAAACAACAAATCGAAAAGCAAGCGCGTAATGTGTCATTACCCCTGAGAGATGTTTTGCATCAACTTCTAGAGTTGTATATGGTTTATTGGACACTGGAGAAAGTTGGCGACTTACTATTGTATACTCAAATATCGGAGAGAGATGTCAAAGCGTTGCAAAGGCGATATGAAGATCTATTGGAGATTTTGCGACCAAATGCTGTGGGATTGGTCGATGCTTTCGACATTAGAGATGAGGTCCTCTGTTCAACGCTGGGTTCGTACGACGGTCGCGTGTACGAACGTCTGATGGAAGAAGCAATGAAAAGTCCTCTCAACAAGGAGCCTGTCCTCTGTTCAACGCTGGGTTCGTACGACGGTCGCGTGTACGAACGTCTCATGGAAGAAGCAATGAAAAGTCCTCTCAACAAGGAGCCTGTGAACGACACTTTCCACAAATATCTTAAGCCCTTTATGCGGGGCAAACTTTAA
>DPOGS201423-PA
MSTITENEDLRKERAKCTFNIEELTYLLDDGYENTRRRRDLENKVLSTKGLLDEIPEEYLSHKEKYENVIRKCVKLHRALLEYDDLRDKPIDEKIKAILRDTVSLAVTKDNSPMMLHSGMFLMAIEGQANEKQQEYWLKRGRNMEIIGTYAQTELGHGTFLRGLELRATYDEKTEEFILHSPTLTSYKWWPGGLAHTANYAIVMAQLYIKDKCYGMQPFMVQLRDEETHMPLPGIKVGEIGPKLGFNTVNNGFLGFENVRIPRDRMLMKNAQVLKDGTFIASPNSKLTYNTMVNVRVLIVNTVAKYLSSASTIAVRYAAVRRQSQMKPGEPEPQILDYVTQQHKLMIAIATSHAYHFTVRWLYDVSDTVKENITKGQLDTLPELHVLACALKVLSSSECTSLVEVCRRACGGHGYMLSSNLPQLYGVCTATMTYEGENTVLLLQVARSLVKAWDRAARGQPLSPSMSYIENKTLAAKWDASLDGIVRNFQIVSRSKLASSVASFQQYMKSGLSYEDAWNKASVQLIAAAEAHGRAIVLAIYKQQIEKQARNVSLPLRDVLHQLLELYMVYWTLEKVGDLLLYTQISERDVKALQRRYEDLLEILRPNAVGLVDAFDIRDEVLCSTLGSYDGRVYERLMEEAMKSPLNKEPVLCSTLGSYDGRVYERLMEEAMKSPLNKEPVNDTFHKYLKPFMRGKL-