Monarch geneset OGS2.0

DPOGS201538
TranscriptDPOGS201538-TA759 bp
ProteinDPOGS201538-PA252 aa
Genomic positionDPSCF300006 + 1604614-1607262
RNAseq coverage767x (Rank: top 17%)
Annotation
HeliconiusHMEL0090763e-3798.63% 
BombyxBGIBMGA002714-TA4e-6959.69% 
DrosophilaSdc-PE3e-3567.29% 
EBI UniRef50UniRef50_B4MJV13e-3671.30%Syndecan n=2 Tax=Diptera RepID=B4MJV1_DROWI
NCBI RefSeqXP_002061404.15e-3771.30%GK20743 [Drosophila willistoni]
NCBI nr blastpgi|1954266029e-3671.30%GK20743 [Drosophila willistoni]
NCBI nr blastxgi|3838663463e-3848.88%PREDICTED: uncharacterized protein LOC100883495 [Megachile rotundata]
Group
Gene OntologyGO:00160202.2e-40membrane
GO:00080922.2e-40cytoskeletal protein binding
KEGG pathwaydwi:Dwil_GK207431e-36 
 K06257 (SDC)maps-> Malaria
    Cell adhesion molecules (CAMs)
    ECM-receptor interaction
InterPro domain[5-252] IPR0010502.2e-40Syndecan
Orthology groupMCL16042 Insect specific
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS201538-TA
ATGACATTATCGGTTATTGTGAACAATGAGACGACTAGTGTTCCTGTGACCGAAGGGACCATCCAGCAGCGGGACGAGCCGCTCGCTTCGGACAAGGATCTCTTCATCGACGATGACGGCTCGGGCCTAGAGATAGACGAGAGCTCCGGCTCCGGCTGGGGGCCCGGCCCCGGACCCGACGACGAAGACGGCCGCGGCTCAGGTGACGCCCCCCATCCCGGGGCCCCCGAGGATGACGAGGACTTCACCCCGCGGAGAATCACCACCACCCTACCGCCGGTCCCAGAGACCGAGCCCTCAGACACTGACAGACCCATCCCAGTAGACTCGTTCGATGTAGTCGGTCCGCGTGTATTGTCCAAGCCTTCGGAAGGTGCTCCAGATATACGCCCCGAGGAGCCCCAGCGACCTGATCAAACCGACATCAGCATATCTGGTGAAGATATCAACCCGAATATTGACCAAGATCAATCTAGTTCGAACGTGGAGCCGGAGTCCCGTCCTTCTGACAACAGCGTCTTCATCATGAACGCCAAACCTGAAGACCGCGCCACCAGCTTCTTCGCCCAACCTGGCATACTGGCCGCTGTGATCGGAGGGGCGGTAGTGGGGCTGTTATGCGCCATCCTAGTGGTCATGTTCATCGTGTACAGGATGCGGAAGAAGGACGAGGGCTCGTACGCCCTGGACGAACCGAAGCGAAGCCCGGCCGCCGCCTCTTACGGGAAAGGTCACAACAACCGGGAGTTCTACGCGTGA

Protein sequence:

>DPOGS201538-PA
MTLSVIVNNETTSVPVTEGTIQQRDEPLASDKDLFIDDDGSGLEIDESSGSGWGPGPGPDDEDGRGSGDAPHPGAPEDDEDFTPRRITTTLPPVPETEPSDTDRPIPVDSFDVVGPRVLSKPSEGAPDIRPEEPQRPDQTDISISGEDINPNIDQDQSSSNVEPESRPSDNSVFIMNAKPEDRATSFFAQPGILAAVIGGAVVGLLCAILVVMFIVYRMRKKDEGSYALDEPKRSPAAASYGKGHNNREFYA-