Monarch geneset OGS2.0

DPOGS201583
TranscriptDPOGS201583-TA1578 bp
ProteinDPOGS201583-PA525 aa
Genomic positionDPSCF300152 - 210322-217865
RNAseq coverage1064x (Rank: top 12%)
Annotation
HeliconiusHMEL0081131e-9064.79% 
BombyxBGIBMGA012206-TA0.094.61% 
Drosophilaslmb-PA0.077.73% 
EBI UniRef50UniRef50_Q9Y2970.081.57%F-box/WD repeat-containing protein 1A n=146 Tax=Coelomata RepID=FBW1A_HUMAN
NCBI RefSeqXP_623915.10.079.06%PREDICTED: similar to supernumerary limbs CG3412-PA [Apis mellifera]
NCBI nr blastpgi|1570926240.0100.00%Slimb [Danaus plexippus]
NCBI nr blastxgi|1570926240.0100.00%Slimb [Danaus plexippus]
Group
Gene OntologyGO:00055157.3e-84protein binding
KEGG pathwayame:5515170.0 
 K03362 (FBXW1_11, BTRC, beta-TRCP)maps-> Shigellosis
    Ubiquitin mediated proteolysis
    Wnt signaling pathway
    Circadian rhythm - mammal
    Hedgehog signaling pathway
    Oocyte meiosis
InterPro domain[192-484] IPR0110467.3e-84WD40 repeat-like-containing domain
[310-485] IPR0159432.8e-47WD40/YVTN repeat-like-containing domain
[75-370] IPR0223646.3e-25F-box domain, Skp2-like
[43-81] IPR0219771.3e-24D domain of beta-TrCP
[259-273] IPR0204722.4e-10G-protein beta WD-40 repeat
[399-435] IPR0197816.7e-10WD40 repeat, subgroup
[235-272] IPR0016802.3e-08WD40 repeat
Orthology groupMCL11279 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS201583-TA
ATGGAAACCGATTGGATGATAGAAGATTCGACGACACCAAAGGTGACGTCATTAACCTCGTTGGACTCCGGAGTCCGACCGGCTCCCAGCGGAGCTGCCTATGTCGCTGAGAGGAACACGTGTCTCAACTTGTTCTCAAGATGGAACGAGACAGACCAGGTGGAGTTTGTGGAACAGTTGCTAGCTCGGATGTGTCACTATCAGCATGGACACATCAACGCCTACCTCAAACCAATGCTGCAGAGGGACTTCATCAGCATGCTTCCAAAGAAGGGTTTGGATCATGTAGCTGAGAATATTCTGTCATACTTGGATGCTGGGTCGCTGTGCGCCGCCGAGCTGGTGTGCCGGGAGTGGCAGAGAGTCATCTCAGAGGGGATGCTGTGGAAGAAACTAGTTGAGAGGAAAGTCAGGACGGACTCCTTGTGGAGGGGACTCGCTGATAGGAGAGGATGGATAATGTACCTCTTCAAACCGAAGCCTGGCTGCCAGCATCCATCCCATTCGTTCTACCGTCAGCTGTATCCCAAGATCATTCAGGACATACAATCCATAGAAGACAACTGGAGAATGGGCCGACACAACTTACAGAGGATAAACTGCAGGTCGGAGAACTCTAAAGGTGTGTACTGCTTACAGTATGACGACAACAAGATAGTCTCCGGCCTGAGAGACAACACTATCAAGATATGGGATAGGAAAACGTTGCAATGTGTTAAGGAGCTGCAAGGTCACACGGGTTCCGTCCTATGTCTGCAATATGATGAGCGAGCCATTATATCTGGGTCCTCGGACAGTACTGTCCGGGTATGGGATGTAAACACGGGGGCCATGCTCAATACACTGATACATCATTGTGAAGCTGTGCTGCATCTGAGGTTCTGCAATGGAATGATGGTGACTTGTAGCAAGGACAGATCGATAGCAGTGTGGGACATGTCTTCGACTACCGAGATCATGCTGCGGCGGGTCCTCGTCGGTCACAGGGCTGCGGTTAACGTTGTGGACTTTGATGAGAAGTATATAGTCAGTGCCAGCGGAGATAGGACTATTAAGGTGTGGAATACCTCCTCGTGTGAGTTTGTCCGGACGTTGAACGGTCACAAACGTGGTATAGCCTGTCTCCAATACAGAGATAGGTTGGTGGTGTCAGGTTCCTCGGACAACACAATCAGACTGTGGGACATTGAGTGCGGACAGTGCATCAGGGTGTTGGAAGGTCACGAGGAACTTGTTCGGTGTATACGGTTCGACAACAAGCGTATAGTCAGCGGGGCATATGATGGGAAGATCAAGGTCTGGGATTTGAGAGCAGCCCTGGACGTGAGAACACCTCACCAGGACCTCTGCCTACGGACACTAGTGGAACACACGGGCAGAGTGTTCCGGCTGCAGTTTGATGAATTCCAAATAGTGTCTTCGTCCCACGATGATACAATTCTAGTGTGGGATTTCCTGAACTACGGTGGGGCTTCGCCAGCGGCGCCCCCGCCCCGTCCAGGTCCTGGCCGCTTGGACGTTATTGCCATGATAGCGTACGAACAGAAAGCGGTCCGACTGCTGTGTTCAGTGATGTGA

Protein sequence:

>DPOGS201583-PA
METDWMIEDSTTPKVTSLTSLDSGVRPAPSGAAYVAERNTCLNLFSRWNETDQVEFVEQLLARMCHYQHGHINAYLKPMLQRDFISMLPKKGLDHVAENILSYLDAGSLCAAELVCREWQRVISEGMLWKKLVERKVRTDSLWRGLADRRGWIMYLFKPKPGCQHPSHSFYRQLYPKIIQDIQSIEDNWRMGRHNLQRINCRSENSKGVYCLQYDDNKIVSGLRDNTIKIWDRKTLQCVKELQGHTGSVLCLQYDERAIISGSSDSTVRVWDVNTGAMLNTLIHHCEAVLHLRFCNGMMVTCSKDRSIAVWDMSSTTEIMLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWNTSSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGQCIRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLRAALDVRTPHQDLCLRTLVEHTGRVFRLQFDEFQIVSSSHDDTILVWDFLNYGGASPAAPPPRPGPGRLDVIAMIAYEQKAVRLLCSVM-