Monarch geneset OGS2.0

DPOGS201600
TranscriptDPOGS201600-TA2463 bp
ProteinDPOGS201600-PA820 aa
Genomic positionDPSCF300152 + 136884-151314
RNAseq coverage338x (Rank: top 34%)
Annotation
HeliconiusHMEL0132162e-10179.61% 
BombyxBGIBMGA012212-TA1e-7863.18% 
DrosophilaCG5498-PB6e-2023.03% 
EBI UniRef50UniRef50_B7PN701e-2831.11%Charged multivesicular body protein, putative n=1 Tax=Ixodes scapularis RepID=B7PN70_IXOSC
NCBI RefSeqXP_002435218.12e-2931.11%charged multivesicular body protein, putative [Ixodes scapularis]
NCBI nr blastpgi|3504167611e-2826.89%PREDICTED: charged multivesicular body protein 7-like [Bombus impatiens]
NCBI nr blastxgi|2420011502e-2830.79%charged multivesicular body protein, putative [Ixodes scapularis]
Group
Gene OntologyGO:00150312.3e-22protein transport
KEGG pathwaysce:YLR025W8e-07 
 K12194 (CHMP4, SNF7, VPS32)maps-> Endocytosis
InterPro domain[471-633] IPR0050242.3e-22Snf7
Orthology groupMCL24800 Lepidoptera specific
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS201600-TA
ATGGGTTTAAGTGAGTGCGGTATTCCCGAAGACAAGCTTCCACCATGCTGGTCGGATGATGTGCGAATGAACGCGTTATTCGCACCGTTCAGGCTGAAAGTCGCGAATCCTGAATCCTGGGATATGAAGATGAAATTCTGGTCAGACATGGTGCGGCAGTGGTGTAGGTGTAAAACGGACCCGATCGTGTCTGCTGCAGATGTCAGAAGCGTGTTCCAAAGGAGAGGAAGGACCGCTGCATGTTTGGACATAGTCATAGAAGAGATGTATCATAATGGTGACCTGTCTCCCATATCAAAGTATCAGCAGATACTCCACAACGGACCTGAGAGCTGGGTCCGTTGGGGAGCCCGGCTTGCCTTCAAACCGGCTGCCATAGCCATCACTGCTGTCACATCACTGCTACCAGCAAGGCAAGCCACGGATAACAACGGTCTGCCAAAAGCGAGTATAGACTCCACACAGAGATTTGTTTTGGAGAGTGCCGTCAAGGAGCAAGCTAATGAGCTGTTGAACAACTTCCCGGCTGGTTCGGAGAGAATTGGCACCATCGACGAGCTAATGAGATCCAGCGGTCACACTAATAGAGAGGTCTATGAAGTTCTCCTGGGTTACTTGGTGTCCCAGGGTATGGCCGTCAAGAGTGGGGATGTCGTGAAAATAGCGGAACCAAACAAAAAAGTCCAGCCGGTTACGGAAATGGACACGGCGATGGTGAAACTGATGTCCGCGGAGACGCGGCTGTCCGACGACGTCGCGCGACTGTCGCGAGACGTGTCCGTCGCGGAGTCTGAGGCGAGGGCCGCCATGAAGCTTGGCAACAAGATCGCTGCTAAGAACCACCTCAGGAGGAAGATGAGGACCCAGCAGAAGCTGCAGCAGTGTGAGGCAGCGCTTGAGAACATCAAGGAGCTCATGTTGCAGGCTAGGAACAGTGACGTCACATCCGCCGTCGTAGATACATACAGTAATGGTGACCTGTCTCCCATATCAAAGTATCAGCAGATACTCCACAACGGACCTGAGAGCTGGGTCCGTTGGGGAGCCCGGCTTGCCTTCAAACCGGCTGCCATAGCCATCACTGCTGTCACATCACTGCTACCAGCAAGGCAAGCCACGGATAACAACGGTCTACCAAAAGCGAGTATAGACTCCACACAGAGATTTGTTTTGGAGAGTGCCGTCAAGGAGCAAGCTAATGAGCTGTTGAACAACTTCCCGGCTGGTTCGGAGAGAATTGGCACCATCGACGAGCTAATGAGATCCAGCGGTCACACTAATAGAGAGGTCTATGAAGTTCTCCTGGGTTACTTGGTGTCCCAGGGTATGGCCGTCAAGAGTGGGGATGTCGTGAAAATAGCGGAACCAAACAAAAAAGTCCAGCCGGTTACGGAAATGGACACGGCGATGGTGAAACTGATGTCCGCGGAGACGCGGCTGTCCGACGACGTCGCGCGACTGTCGCGAGACGTGTCCGTCGCGGAGTCTGAGGCGAGGGCCGCCATGAAGCTTGGCAACAAGATCGCTGCTAAGAACCACCTCAGGAGGAAGATGAGGACCCAGCAGAAGCTGCAGCAGTGTGAGGCAGCGCTTGAGAACATCAAGGAGCTCATGTTGCAGGCTAGGAACAGTGACGTCACATCCGCCGTCGTAGATACATACAGGAACAGCGCCAAAGCTATGAAGCAAACAATGAGAGACGGCGGCCTGGACGAGGACTCTGTTTACCATACGATGGATGACTTGAAAGATGTCATGGACAGTTACAACGAAGTAGAGAAAGCTCTCGGCGGTGTCGTGGAGGACGTGGACGTGGACGACCTGGAACACGAGCTGAAGGAACTGCTGGAGGGCGGGGACGGCGACGGGGGGGACGGAGTGTGTCTGCCGTCACCGCCACGTCAGCAGCCGGAGAGGGAGAACTCGTTCGTGTTTGACGGGGAGGAGAGGATGCTGGCCGACCTGAGGGACCTCGGGGAGGAGAAGGGGAGAGAGAAGGAAAAGGAAAAGGAGCAGGTCTTAGTGGCGGAGGGAGTGGCAGATAGTGAGAAATCCCCTAAAGCCAAGGTGAGGGCCAGCCAACCGTGGTATCCGCCGAGCGACTGGTCCAACATGAACACCAACATCGACAACATGGCCAAGGACTACGCCGAACTGAGATTGGACAACAGACTGCATCCGGGTCAGCCCCTGGACGTGGACTTCACGACTCCTCCGCAGTACACCGGGGACTACCACGTGCGTGACCACCGAGCCGGCGCCAGAGTGTGGCTCTACAACAGCAGAGATGAACTGGCACCGAGCACGGAGTACTGCAGTTCGGAGAGTCCCGGCAAAGAAACTGATTCAAAGTCCTTCCAAATGGCACCGGGAGGTGAGAGGAAGAAGTCCGAGGCCTGGCCCAAGGACGATGTCCAGGACTTGGAGAGGAGGCTGAAGAACTTGAGGGGTTTGAACTTGTAG

Protein sequence:

>DPOGS201600-PA
MGLSECGIPEDKLPPCWSDDVRMNALFAPFRLKVANPESWDMKMKFWSDMVRQWCRCKTDPIVSAADVRSVFQRRGRTAACLDIVIEEMYHNGDLSPISKYQQILHNGPESWVRWGARLAFKPAAIAITAVTSLLPARQATDNNGLPKASIDSTQRFVLESAVKEQANELLNNFPAGSERIGTIDELMRSSGHTNREVYEVLLGYLVSQGMAVKSGDVVKIAEPNKKVQPVTEMDTAMVKLMSAETRLSDDVARLSRDVSVAESEARAAMKLGNKIAAKNHLRRKMRTQQKLQQCEAALENIKELMLQARNSDVTSAVVDTYSNGDLSPISKYQQILHNGPESWVRWGARLAFKPAAIAITAVTSLLPARQATDNNGLPKASIDSTQRFVLESAVKEQANELLNNFPAGSERIGTIDELMRSSGHTNREVYEVLLGYLVSQGMAVKSGDVVKIAEPNKKVQPVTEMDTAMVKLMSAETRLSDDVARLSRDVSVAESEARAAMKLGNKIAAKNHLRRKMRTQQKLQQCEAALENIKELMLQARNSDVTSAVVDTYRNSAKAMKQTMRDGGLDEDSVYHTMDDLKDVMDSYNEVEKALGGVVEDVDVDDLEHELKELLEGGDGDGGDGVCLPSPPRQQPERENSFVFDGEERMLADLRDLGEEKGREKEKEKEQVLVAEGVADSEKSPKAKVRASQPWYPPSDWSNMNTNIDNMAKDYAELRLDNRLHPGQPLDVDFTTPPQYTGDYHVRDHRAGARVWLYNSRDELAPSTEYCSSESPGKETDSKSFQMAPGGERKKSEAWPKDDVQDLERRLKNLRGLNL-