DPOGS201615 | ||
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Transcript | DPOGS201615-TA | 276 bp |
Protein | DPOGS201615-PA | 91 aa |
Genomic position | DPSCF300152 + 415807-416082 | |
RNAseq coverage | 355x (Rank: top 33%) |
Annotation | ||||
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Heliconius | HMEL008110 | 6e-41 | 75.82% |   |
Bombyx | BGIBMGA012204-TA | 3e-41 | 76.92% |   |
Drosophila | CG13126-PA | 1e-18 | 50.68% |   |
EBI UniRef50 | UniRef50_E2C7Z7 | 7e-24 | 54.55% | Protein RSM22-like protein, mitochondrial n=1 Tax=Harpegnathos saltator RepID=E2C7Z7_HARSA |
NCBI RefSeq | XP_001122836.1 | 8e-22 | 52.75% | PREDICTED: similar to CG13126-PA, partial [Apis mellifera] |
NCBI nr blastp | gi|307192887 | 3e-23 | 54.55% | Protein RSM22-like protein, mitochondrial [Harpegnathos saltator] |
NCBI nr blastx | gi|307192887 | 5e-23 | 54.55% | Protein RSM22-like protein, mitochondrial [Harpegnathos saltator] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0008168 | 2.6e-17 | methyltransferase activity | |
GO:0006412 | 2.6e-17 | translation | ||
KEGG pathway | spo:SPAC1420.04c | 6e-07 |   | |
  | K02258 (COX11) | maps-> | Oxidative phosphorylation | |
InterPro domain | [14-89] IPR015324 | 2.6e-17 | Ribosomal protein Rsm22, bacterial-type | |
Orthology group | MCL11700 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS201615-TA
ATGAAGTATGAGACATTGCCGTTCCCTTCAAAAAGCGAAGTTATGGCTGAGTTATTCTCGTATGTTATTTTAAGGAAAGGTGCGAGACCGTCCAATGATCCCGGTTGGCCGAGGGTGGTTAGGGCTCCAATAGTGAGATCAGGCCACACTATTTGTAGAATGTGCACGGCACAGGGTGAATTAGAGGAAGTGATTTTCTCAAAAGCCAAATATGATCAGAAAACTTACCGATGTGCCAGATCTTGCAACTGGGGTGATCTGCTGCCCGTCAAATAA
>DPOGS201615-PA
MKYETLPFPSKSEVMAELFSYVILRKGARPSNDPGWPRVVRAPIVRSGHTICRMCTAQGELEEVIFSKAKYDQKTYRCARSCNWGDLLPVK-