Monarch geneset OGS2.0

DPOGS201617
TranscriptDPOGS201617-TA1881 bp
ProteinDPOGS201617-PA626 aa
Genomic positionDPSCF300152 + 464505-477371
RNAseq coverage1082x (Rank: top 12%)
Annotation
HeliconiusHMEL0101490.088.87% 
BombyxBGIBMGA012171-TA0.091.15% 
Drosophilakst-PE0.065.77% 
EBI UniRef50UniRef50_A8JNJ60.065.77%Karst, isoform E n=13 Tax=Opisthokonta RepID=A8JNJ6_DROME
NCBI RefSeqXP_001606391.10.071.57%PREDICTED: similar to beta chain spectrin [Nasonia vitripennis]
NCBI nr blastpgi|3504076510.071.53%PREDICTED: spectrin beta chain, brain 4-like [Bombus impatiens]
NCBI nr blastxgi|3504076510.071.43%PREDICTED: spectrin beta chain, brain 4-like [Bombus impatiens]
Group
Gene OntologyGO:00055154.1e-80protein binding
KEGG pathway 
InterPro domain[34-288] IPR0017154.1e-80Calponin homology domain
[437-537] IPR0181591e-16Spectrin/alpha-actinin
[447-536] IPR0020173.1e-13Spectrin repeat
Orthology groupMCL10058 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS201617-TA
ATGCAGAGGCAGTTGAGCAACGTCAGCATACACTCCTACCAGGAGTACCAGCCCACCAGGAAATATGGGCCGCAGTATGAGCCGGGCGGGTACGCCACGGTAGTGCAACAACGTACCAATATGAAGCAGCGAGAAGACGCTCTGAAGTTTGAGCAGGGCCGGATCAGGGCCTTGCAGGAGGAGAGGCAGCACATACAGAAGAAGACCTTCACGAAATGGGTCAATTCATTCTTGCAGAAGGCGAGGATGGAGGTGGAGGACCTGTTCGTGGATCTCGCAGACGGCCGTCGCCTGCTGAAGCTGCTGGAGATCATCAGCGGCGAGAGACTGCCTCGCCCCAACTCCGGCCGGATGAGGGTCCACAAGATAGAGAACGTCAACAAATCCCTCAGTTTCCTCCACACCAAGGTCCGCTTGGAGTCCATCGGTGCTGAGGACATCGTGGACTGCAACCCTCGTCTCATCCTGGGCCTCATCTGGACCATCATCCTCCGCTTCCAGATCCAGGAGATAGAAATCGATGTGGATGAAGAGAATGTGTCGTCAGAGAAGAAATCAGCCAAGGACGCCCTCCTGCTGTGGTGTCAGCGGAAGACCAGCGGCTACCACGGCGTCCACATACACAACTTCACAGACTCCTGGAGATCAGGACTTGGATTCAACGCTCTCATACACGCTCACAGACCAGATCTTTTCCGCTGGTCCGAGCTGCCGACCTCCGACCACGTGGAGACTCTCAACCATGCTTTCGACGTAGCCCACACACACCTTGGGATACCGAAGCTATTGGATGCTGAAGACGTCGACACCACCCGACCCGACGAGCGATCCGTGATGACGTACGTGGCCAGCTACTACCACACCTTCGCCAGGATGAAGAACGAGCAGAAGAGCGGCCGCAGGATCGCCAACATCATCGGCCAGCTGATGGACTGTGACGGTCGCAAGGCGGAGTACAGTCGCCTGGTGTGTGCTCTGCTCGAGTGGATCCGTCTGAAGATACAGGAGCTGAACTGCCGCGAGCTTCCCAACTCGCTGGACGGCATCCAACGTCTGTTGCTGGCCTTCAAACAGTACAGGACCGTGGAGAAGCCGCCCAAGTATAAGGAACGTTCTGAAATCGAGGCGTTGTACTTCGATATCAACACGATGCAGAAGAGTTTAGTGGGGGAGCCCTGGGCCCCGCTCGAGGGACAGCTGCCTCAAGACCTGCAGCGAGCCTGGCAACAGCTGGAACAGGCGGAGCACTCCCGGGAGCTGGCGCTTCGCACTGAACTGTTAAGACAGGAGAGGCTCGAGCAACTGGCATACAAGTTCCATACTAAGTCTGTTCTCCGTAAGGGGTACCTCAAGGAGATGATCCAGGTCTTATCTGACCCTCGCTACGGGTCCAACGTGGCGCAGGTGGACGCCACCGTCAAGAAACATGAAGCTATATCAGCTGATATCCTCGCCAGGACGGAGCGGTTCGAGGATCTATCGGCTATGGCGGCGGAGCTGGTGAAGGAGAAGTACCACGGGGCGGAGAGCGTCTCCCACACAGAACAGGCAGTGCTGGCCAGGTGGAGGGAACTTCTGGCGCTGCTGGAGAGACACAGGGCAGCGCTGGCTACTCTGGCCCAGCTGGTGGCGCTGCTCAGGGAAGCTGAGGCTGTGGGGCACACGCTGCTAGAGATGAAGGCTCAATTCCAATCCGAGGAGGTCGGTAGACACCTGGTGGATGTGGAGCGTCTGCTGCAGGCGCACGCCCTCCAGGAACTGCAGCTGGGGGCTCTGGATGACACCATCAAGAGACTGGCGAGAGCGGGGGCGGGAGACCACGCCTCCGCCGCCCAGCTCCGGGGCGCCCTGGACTCACTGACTGATGATTATACCGGGTGA

Protein sequence:

>DPOGS201617-PA
MQRQLSNVSIHSYQEYQPTRKYGPQYEPGGYATVVQQRTNMKQREDALKFEQGRIRALQEERQHIQKKTFTKWVNSFLQKARMEVEDLFVDLADGRRLLKLLEIISGERLPRPNSGRMRVHKIENVNKSLSFLHTKVRLESIGAEDIVDCNPRLILGLIWTIILRFQIQEIEIDVDEENVSSEKKSAKDALLLWCQRKTSGYHGVHIHNFTDSWRSGLGFNALIHAHRPDLFRWSELPTSDHVETLNHAFDVAHTHLGIPKLLDAEDVDTTRPDERSVMTYVASYYHTFARMKNEQKSGRRIANIIGQLMDCDGRKAEYSRLVCALLEWIRLKIQELNCRELPNSLDGIQRLLLAFKQYRTVEKPPKYKERSEIEALYFDINTMQKSLVGEPWAPLEGQLPQDLQRAWQQLEQAEHSRELALRTELLRQERLEQLAYKFHTKSVLRKGYLKEMIQVLSDPRYGSNVAQVDATVKKHEAISADILARTERFEDLSAMAAELVKEKYHGAESVSHTEQAVLARWRELLALLERHRAALATLAQLVALLREAEAVGHTLLEMKAQFQSEEVGRHLVDVERLLQAHALQELQLGALDDTIKRLARAGAGDHASAAQLRGALDSLTDDYTG-