DPOGS201654 | ||
---|---|---|
Transcript | DPOGS201654-TA | 618 bp |
Protein | DPOGS201654-PA | 205 aa |
Genomic position | DPSCF300254 + 162912-167833 | |
RNAseq coverage | 782x (Rank: top 16%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL015668 | 7e-95 | 76.10% |   |
Bombyx | BGIBMGA008203-TA | 1e-70 | 65.54% |   |
Drosophila | % |   | ||
EBI UniRef50 | UniRef50_C3ZVQ0 | 8e-35 | 40.98% | Putative uncharacterized protein (Fragment) n=2 Tax=Branchiostoma floridae RepID=C3ZVQ0_BRAFL |
NCBI RefSeq | XP_001176073.1 | 5e-34 | 34.59% | PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] |
NCBI nr blastp | gi|157822867 | 3e-36 | 39.89% | prostamide/prostaglandin F synthase [Rattus norvegicus] |
NCBI nr blastx | gi|157822867 | 2e-34 | 39.89% | prostamide/prostaglandin F synthase [Rattus norvegicus] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0016209 | 6.9e-06 | antioxidant activity | |
GO:0055114 | 6.9e-06 | oxidation-reduction process | ||
GO:0016491 | 6.9e-06 | oxidoreductase activity | ||
KEGG pathway |   | |||
InterPro domain | [142-165] IPR012336 | 4.2e-06 | Thioredoxin-like fold | |
[18-100] IPR000866 | 6.9e-06 | Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant | ||
Orthology group | MCL20476 |   | Patchy |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS201654-TA
ATGTCTTTCGATTTATCTAAAATAAGTTCTCAGAAAGTAAAAGCAATTCCTGGTGGAGAGACTGTGGAGATGCAAAGTTTCTGGAAGGATCAAAATGTGGCAATAATATTCTTTCGCCGCTGGGGTTGTATGTTTTGCAGATTGTGGGCTAAGGAGCTGGGTGAAATATACCCGATCCTAAAGAAGAATAATATCAGACTTGTTGGGATAGGGATTGAGGAGGCGGGTTCCAAGGAATTTGTTGATGGCAAATATTTTAATGGAGATCTATTCTATGCTGAAGATAAATCCATTTATCAGACTCTGGAATTCAAGAGATTCAATTTGGTGTCCATTATTACATCACTGTTTTGGAAGCAATCTAGAGAGGCAATCGTCAAAGGAAAAAGCCTCGGTTTAGGGGGCGATCTGAAAGGTGACTGGGTCCAAACGGGCGGCGCCTTACTCGTGGGTCCCGGAGGAAGACTTATAAAATATTTCACCCAAACCGGCCCAAGCGATCATTTACCCAACTCTGACATATTGAAGCTCTTTGATCTGGAGAATGAATACAAGGCAGATACAATGGCGAATAAGAAACGTGATGGTACTGAATGTAGTACAGAACAAACATCTTAG
>DPOGS201654-PA
MSFDLSKISSQKVKAIPGGETVEMQSFWKDQNVAIIFFRRWGCMFCRLWAKELGEIYPILKKNNIRLVGIGIEEAGSKEFVDGKYFNGDLFYAEDKSIYQTLEFKRFNLVSIITSLFWKQSREAIVKGKSLGLGGDLKGDWVQTGGALLVGPGGRLIKYFTQTGPSDHLPNSDILKLFDLENEYKADTMANKKRDGTECSTEQTS-