| DPOGS201661 | ||
|---|---|---|
| Transcript | DPOGS201661-TA | 699 bp |
| Protein | DPOGS201661-PA | 232 aa |
| Genomic position | DPSCF300103 - 505819-506776 | |
| RNAseq coverage | 256x (Rank: top 41%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL011929 | 2e-109 | 81.17% | |
| Bombyx | BGIBMGA005414-TA | 1e-39 | 74.26% | |
| Drosophila | Aats-ser-PA | 3e-70 | 56.84% | |
| EBI UniRef50 | UniRef50_E0VNG4 | 1e-75 | 58.22% | Seryl-tRNA synthetase, putative n=1 Tax=Pediculus humanus corporis RepID=E0VNG4_PEDHC |
| NCBI RefSeq | XP_001607907.1 | 3e-79 | 63.47% | PREDICTED: similar to CG4938-PA [Nasonia vitripennis] |
| NCBI nr blastp | gi|270001083 | 6e-81 | 62.93% | hypothetical protein TcasGA2_TC011377 [Tribolium castaneum] |
| NCBI nr blastx | gi|270001083 | 1e-77 | 62.93% | hypothetical protein TcasGA2_TC011377 [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005524 | 6.3e-111 | ATP binding | |
| GO:0004828 | 6.3e-111 | serine-tRNA ligase activity | ||
| GO:0000166 | 6.3e-111 | nucleotide binding | ||
| GO:0006434 | 6.3e-111 | seryl-tRNA aminoacylation | ||
| GO:0005737 | 6.3e-111 | cytoplasm | ||
| GO:0006418 | 4e-23 | tRNA aminoacylation for protein translation | ||
| GO:0004812 | 4e-23 | aminoacyl-tRNA ligase activity | ||
| KEGG pathway | nvi:100124073 | 9e-79 | ||
| K01875 (SARS, serS) | maps-> | Aminoacyl-tRNA biosynthesis | ||
| InterPro domain | [4-216] IPR002317 | 6.3e-111 | Seryl-tRNA synthetase, class IIa | |
| [20-138] IPR002314 | 4e-23 | Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain | ||
| Orthology group | MCL13541 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS201661-TA
ATGTCTATCAATAGTGACAGAACACAGATTTACTCATTGGACCCAGTCTATCATGGTCCTGACCTCTATTTATCAGGGACTGCTGAAATGTCTTTGGCTGGTCTTTTGTCCAACTCGTTAACACATAAAAAAGACCTCCCACTGAAATTGGCAGCTGTTAGTAGATGCTATCGTGCTGAAACATCAAATGTGGTGGAAGAAAGAGGAATATATAGAGTGCATCAATTTACTAAAGTAGAGATGTTTGCAGTTACATTTCCAGAACATTCTGATGAAATGCTAGAATATATCAGACAGACCCAAGAAGAATTATTTGGACCTCTTGGTCTGTATATGAAAGTTTTGGATATGCCGCCTCATGAATTGGGAGCACCAGCTTATAGAAAATATGACATTGAGGCTTGGATGCCAGGACGTAATAAATTTGGTGAGATATCAAGCTGTAGCAACTGCACTGATTATCAATCAAGAAGACTTAATATTAAATATAAGGATGGGAATTCTGAGAAATACACACATACATTGAATGGAACTGCTTGTGCTATACCGAGAATGTTGATCGCATTGCTGGAGACGCACCAAGATGCTAAAGGGAAGATACATATACCAACAGTCTTACAACCGTTCATGGATGGAAAGAAATATATAAGTAAAAACACAGTTGTGCCGAAGTTAAAATTAATTAAACTTAAGAAGTAA
>DPOGS201661-PA
MSINSDRTQIYSLDPVYHGPDLYLSGTAEMSLAGLLSNSLTHKKDLPLKLAAVSRCYRAETSNVVEERGIYRVHQFTKVEMFAVTFPEHSDEMLEYIRQTQEELFGPLGLYMKVLDMPPHELGAPAYRKYDIEAWMPGRNKFGEISSCSNCTDYQSRRLNIKYKDGNSEKYTHTLNGTACAIPRMLIALLETHQDAKGKIHIPTVLQPFMDGKKYISKNTVVPKLKLIKLKK-