Monarch geneset OGS2.0

DPOGS201664
TranscriptDPOGS201664-TA630 bp
ProteinDPOGS201664-PA209 aa
Genomic positionDPSCF300103 - 428054-429436
RNAseq coverage943x (Rank: top 14%)
Annotation
HeliconiusHMEL0119341e-3785.88% 
BombyxBGIBMGA005419-TA3e-8084.94% 
DrosophilaCHMP2B-PA2e-5858.65% 
EBI UniRef50UniRef50_Q9VRJ52e-5658.65%CG4618 n=20 Tax=Arthropoda RepID=Q9VRJ5_DROME
NCBI RefSeqXP_002432114.12e-7063.16%Charged multivesicular body protein 2B, putative [Pediculus humanus corporis]
NCBI nr blastpgi|2420233844e-6963.16%Charged multivesicular body protein 2B, putative [Pediculus humanus corporis]
NCBI nr blastxgi|2420233844e-6863.16%Charged multivesicular body protein 2B, putative [Pediculus humanus corporis]
Group
Gene OntologyGO:00150311.2e-38protein transport
KEGG pathwayphu:Phum_PHUM5699806e-70 
 K12192 (CHMP2B)maps-> Endocytosis
InterPro domain[16-184] IPR0050241.2e-38Snf7
Orthology groupMCL17788 Patchy
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS201664-TA
ATGAACTTTTTCAAAAAGGCACCAACAGTGAAAGAACAGCAACGAGAAAATGATCGTGAACTTCGGAAAGCAGGTAGAGATTTGGAACGTGATAAAAATGCATTGGAAAGAGAAGAAAAGAAGTTGGAGTTGGAAATAAAAAAAATGGCGAAAGAAGGAAATAACGAAGGTTGTAAAATACTTGCTAAGCAATTAGTACAAATGCGTAAGCAGAAAACTCGTATGTATGCAGCTAACAGTAAGATATCCAGTGTACAAATTCACAATAAAGCAATGGGTGCAAATATAGCTATTGCAGGTGCAATGGGTACAACAGCCAAGACCATGGGCAACATTAACAAAATATTGAACCCTGCACAAATATCGAAAGACATGGAAGCATTCAAAGTGGCCAGTGCTAAAATGGATATGACTGATGAAATGATTTCAGAAACTTTAGATGACATCATGACCGAGTCTGGGGATGAAGAGGAAACTGAAGGTGTTGTCAACCAAGTCCTTGATGAAATTGGTATTGAAATAAGTGGAAAGATGGCCAATGCACCTTCAGTTTCTCGCAACAAAGTTGGTGAATCCACATCTGACATTGACAAAGAACTTATGGCGCAGCTAACAAAACTCAAGTCATAG

Protein sequence:

>DPOGS201664-PA
MNFFKKAPTVKEQQRENDRELRKAGRDLERDKNALEREEKKLELEIKKMAKEGNNEGCKILAKQLVQMRKQKTRMYAANSKISSVQIHNKAMGANIAIAGAMGTTAKTMGNINKILNPAQISKDMEAFKVASAKMDMTDEMISETLDDIMTESGDEEETEGVVNQVLDEIGIEISGKMANAPSVSRNKVGESTSDIDKELMAQLTKLKS-