| DPOGS201708 | ||
|---|---|---|
| Transcript | DPOGS201708-TA | 708 bp |
| Protein | DPOGS201708-PA | 235 aa |
| Genomic position | DPSCF300096 + 528587-530694 | |
| RNAseq coverage | 3249x (Rank: top 4%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL016882 | 5e-67 | 74.90% | |
| Bombyx | BGIBMGA010756-TA | 5e-47 | 53.81% | |
| Drosophila | CG1240-PA | 4e-35 | 71.76% | |
| EBI UniRef50 | UniRef50_D3TMI6 | 2e-42 | 45.00% | RNA polymerase I transcription factor subunit Spp27 n=2 Tax=Endopterygota RepID=D3TMI6_GLOMM |
| NCBI RefSeq | XP_966482.1 | 1e-45 | 50.19% | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] |
| NCBI nr blastp | gi|91090326 | 2e-44 | 50.19% | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] |
| NCBI nr blastx | gi|345490916 | 6e-71 | 54.31% | PREDICTED: upstream activation factor subunit spp27-like [Nasonia vitripennis] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005515 | 2.5e-25 | protein binding | |
| KEGG pathway | ||||
| InterPro domain | [159-233] IPR003121 | 2.5e-25 | SWIB/MDM2 domain | |
| [158-235] IPR019835 | 2.2e-22 | SWIB domain | ||
| [5-56] IPR014876 | 4.1e-13 | DEK, C-terminal | ||
| Orthology group | MCL17504 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS201708-TA
ATGGCAGATGTTAGTAAAGAAGATCTTGAAAGGGAAATCGAAAAGATCCTTAAAAATGCTAACCTCGCAAACACATCCACGAAAAAGGTCATACAAAAGTTGGAGAAAGTGTTTGACACAGATTTGTCGGAGAAGAAGAAGGTTATTGACCAACTGGTGATGGACTATGTGAACAGTAAGAACTCTGAAGATGAATACGATGAAGAGGATGATGATGAGGAAGAAGAAGAAGAAAAAAAGCCTGCAAAGCGTAGTGCGCCTGCTAGCAAGGCCAGTAACAAGAAATCACGAAAAGATAGTTCCGATGAAGACGATGATGCTTCAGGAGACAGCGAGTCAGAGGAAGAGAAGAAACCAGCTCCTAAGAAGGGTAAGAAGAAGAAGGGATCCTCAGATTCAGACAGTGATTGGGGCAAGAAGAAAGAAAAGGCAGCCAAACCGAAAAAGGGTGGTGGGCGGAAAGGCGGAGGATACACCAGAGCTTACAAGTTGTCTCCGGCCCTATCAGAACTCATGGGGGAAACGGAAATGCCGCGACATGAAGTGGTCAAACGTGTTTGGACCATCATCAAAGAAAAGAATCTGTACGATCCCAATAACAAACAGTTTGCTATCTGTGACGACGCGCTGTACAAAGTGATAGGAACCAAACGTTTCCGGACCTTTGGCATGATGAAGTATCTCAAAACGCATTTCCTCGATGACTAA
>DPOGS201708-PA
MADVSKEDLEREIEKILKNANLANTSTKKVIQKLEKVFDTDLSEKKKVIDQLVMDYVNSKNSEDEYDEEDDDEEEEEEKKPAKRSAPASKASNKKSRKDSSDEDDDASGDSESEEEKKPAPKKGKKKKGSSDSDSDWGKKKEKAAKPKKGGGRKGGGYTRAYKLSPALSELMGETEMPRHEVVKRVWTIIKEKNLYDPNNKQFAICDDALYKVIGTKRFRTFGMMKYLKTHFLDD-