DPOGS201811 | ||
---|---|---|
Transcript | DPOGS201811-TA | 576 bp |
Protein | DPOGS201811-PA | 191 aa |
Genomic position | DPSCF300145 + 197734-198676 | |
RNAseq coverage | 237x (Rank: top 43%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL015519 | 2e-99 | 93.19% |   |
Bombyx | BGIBMGA013243-TA | 1e-88 | 85.86% |   |
Drosophila | CG31229-PA | 5e-58 | 64.48% |   |
EBI UniRef50 | UniRef50_Q8IN78 | 6e-56 | 64.48% | Mitochondrial import inner membrane translocase subunit Tim22 n=28 Tax=Arthropoda RepID=TIM22_DROME |
NCBI RefSeq | XP_312898.3 | 3e-68 | 63.45% | AGAP003199-PA [Anopheles gambiae str. PEST] |
NCBI nr blastp | gi|118783304 | 5e-67 | 63.45% | AGAP003199-PA [Anopheles gambiae str. PEST] |
NCBI nr blastx | gi|118783304 | 2e-64 | 68.36% | AGAP003199-PA [Anopheles gambiae str. PEST] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0008565 | 1.9e-36 | protein transporter activity | |
GO:0005743 | 1.9e-36 | mitochondrial inner membrane | ||
GO:0015031 | 1.9e-36 | protein transport | ||
KEGG pathway |   | |||
InterPro domain | [65-189] IPR003397 | 1.9e-36 | Mitochondrial inner membrane translocase complex, subunit Tim17/22 | |
Orthology group | MCL14179 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS201811-TA
ATGACTGAATATAGGAAACCTCCCGTCGACCCCGATTTAATTAAATTCTCAGAGAAAGATGACTACGACTCCCTTGCAAAATATTTAGTCGGTAACATATACCGATATCGTGAAAACATAATCATACCCAGAGTATTGGGTCCTGTTATCATTAAAACAAATGAAGAGAAGATGATCGAGGCCACTGTTGAAAGTTGCCCATTTAAATCTTTCACCAGTTGTGTTATAGGTTATGGTTTGGGAGCTGCTGTAGGCTTATTCACTTCATCGCTTATGCCTAATATGAGTGACCCAATGGCACAACAAAATCAAACAGCGAGGGAAATCTTGAGAGAAATGAAAAACTCAATGTTGAGCTACGCCAAGAACTTTGCTATACTCGGTGCAGTCTTTTCCGGAGTCGAATGTTGTATAGAAAGCGCAAGGGGCAAATCAGATTGGAAGAATGGGACATACGCTGGTGGCGTTACCGGTGGGCTTATAGGTTTAAGAGGTGGTTTAAAAGCTGGTGTATTTGGTGCTGCAGGTTTTGCTGCATTTTCAACTGTCATTGATTACTATATGCATCAACGCTAG
>DPOGS201811-PA
MTEYRKPPVDPDLIKFSEKDDYDSLAKYLVGNIYRYRENIIIPRVLGPVIIKTNEEKMIEATVESCPFKSFTSCVIGYGLGAAVGLFTSSLMPNMSDPMAQQNQTAREILREMKNSMLSYAKNFAILGAVFSGVECCIESARGKSDWKNGTYAGGVTGGLIGLRGGLKAGVFGAAGFAAFSTVIDYYMHQR-