| DPOGS201842 | ||
|---|---|---|
| Transcript | DPOGS201842-TA | 414 bp |
| Protein | DPOGS201842-PA | 137 aa |
| Genomic position | DPSCF300191 - 381605-383891 | |
| RNAseq coverage | 20x (Rank: top 79%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL003933 | 4e-23 | 51.61% | |
| Bombyx | BGIBMGA006094-TA | 1e-26 | 52.58% | |
| Drosophila | % | |||
| EBI UniRef50 | UniRef50_D6WJN1 | 2e-09 | 45.07% | Putative uncharacterized protein n=1 Tax=Tribolium castaneum RepID=D6WJN1_TRICA |
| NCBI RefSeq | XP_969552.1 | 3e-10 | 45.07% | PREDICTED: similar to laminin alpha-1, 2 chain [Tribolium castaneum] |
| NCBI nr blastp | gi|91084119 | 7e-09 | 45.07% | PREDICTED: similar to laminin alpha-1, 2 chain [Tribolium castaneum] |
| NCBI nr blastx | gi|91084119 | 3e-09 | 45.07% | PREDICTED: similar to laminin alpha-1, 2 chain [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | mmu:16772 | 1e-08 | ||
| K05637 (LAMA1) | maps-> | Small cell lung cancer | ||
| Pathways in cancer | ||||
| Amoebiasis | ||||
| Focal adhesion | ||||
| ECM-receptor interaction | ||||
| InterPro domain | [40-113] IPR008211 | 1.8e-11 | Laminin, N-terminal | |
| Orthology group | MCL18841 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS201842-TA
ATGATATTTGATATTTCAGTATTGGAACCTCAGCGTTCTGATTATATTATATGTTTTTATGAGCATATTCAATCCAAATATATAAGTTCAATAATAAAACAAGACTTGAATCAAAAGACTCTCGCAGTTATTAGCGCTAATGCAACTTGTGGAGATAATGGAGCAGAGGAGTTCTGCAGGGAGACTGCGGGAAAACGGGTTGTAGTATGTGATGTGTGTGAGGGTCCTGAAGGCCCGTCATCTCGTCGTCACCCTGCAGGTCTGGCCGTGGACGGTGACCCATCCACTTGGTGGCAGAGTCCTATCATCACTGATGGCAACTACCAGAATGTGGAACTAGTAGCTGTTTTACCCGGGGGGATGATCAATAAAAAGTATCTGAGACCACCCGTCCCGAGAGAAATGGCCCTATAA
>DPOGS201842-PA
MIFDISVLEPQRSDYIICFYEHIQSKYISSIIKQDLNQKTLAVISANATCGDNGAEEFCRETAGKRVVVCDVCEGPEGPSSRRHPAGLAVDGDPSTWWQSPIITDGNYQNVELVAVLPGGMINKKYLRPPVPREMAL-