Monarch geneset OGS2.0

DPOGS201872
TranscriptDPOGS201872-TA630 bp
ProteinDPOGS201872-PA209 aa
Genomic positionDPSCF300191 + 136802-141896
RNAseq coverage5161x (Rank: top 2%)
Annotation
HeliconiusHMEL0134362e-5898.13% 
BombyxBGIBMGA006045-TA6e-10788.73% 
DrosophilaRab5-PC3e-9076.10% 
EBI UniRef50UniRef50_P610205e-9681.60%Ras-related protein Rab-5B n=49 Tax=Opisthokonta RepID=RAB5B_HUMAN
NCBI RefSeqNP_001037614.12e-10588.73%small GTP binding protein RAB5 [Bombyx mori]
NCBI nr blastpgi|1129832623e-10488.73%small GTP binding protein RAB5 [Bombyx mori]
NCBI nr blastxgi|1129832622e-10089.67%small GTP binding protein RAB5 [Bombyx mori]
Group
Gene OntologyGO:00072641.1e-92small GTPase mediated signal transduction
GO:00055251.1e-92GTP binding
GO:00150311.1e-92protein transport
GO:00160202e-30membrane
GO:00071652e-30signal transduction
GO:00061842e-30GTP catabolic process
GO:00039242e-30GTPase activity
GO:00056226.1e-11intracellular
GO:00068866.6e-06intracellular protein transport
GO:00069136.6e-06nucleocytoplasmic transport
KEGG pathwaytca:1001415721e-98 
 K07889 (RAB5C)maps-> Amoebiasis
    Endocytosis
    Phagosome
    Vasopressin-regulated water reabsorption
InterPro domain[21-184] IPR0035791.1e-92Small GTPase superfamily, Rab type
[22-181] IPR0018061.5e-61Small GTPase superfamily
[18-184] IPR0208492e-30Small GTPase superfamily, Ras type
[21-174] IPR0052257.1e-27Small GTP-binding protein domain
[23-183] IPR0035786.1e-11Small GTPase superfamily, Rho type
[26-202] IPR0020416.6e-06Ran GTPase
Orthology groupMCL10834 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS201872-TA
ATGGCAACGAACCGAAGTGCTCAGAGGCCAAACGGGGCGCCTCAGACTAAGGTGTGCCAGTTCAAGCTGGTTCTGTTGGGTGAGTCGGCTGTGGGCAAGTCTTCATTGGTGCTACGTTTCGTGAAGGGTCAGTTCCATGAGTATCAAGAGAGCACTATCGGAGCAGCATTCCTTACACAGACGCTCTGCCTCGACGACACCACTGTCAAGTTTGAAATTTGGGACACGGCAGGACAGGAGAGATATCACAGCCTAGCTCCTATGTACTACCGGGGAGCGCAGGCCGCCATCGTAGTCTACGACATTACTAATCAGGACACATTCGGTCGCGCCAAGAACTGGGTGAAGGAGCTCCAGCGGCAGGCGTCTCCGTCCATCGTGATCGCTCTGGCCGGGAACAAGAGCGACCTGGCCGCCAAGAGGATGGTCGAGTTCGAGGAGGCGCAGGCCTACGCCGACGAGAACGGCCTGCTCTTCATGGAGACCAGCGCCAAGACCGCCATGAACGTTAACGATATATTCCTAGCTATCGCGAACAAGTTACCAAAGAGCGAGGTGTCCAGCGGCGGCGCGGGGACCAGAGTGCTCAACGACGCGGACGCGCCGCGGAGCTCCTCCTGCTGCAAGTGA

Protein sequence:

>DPOGS201872-PA
MATNRSAQRPNGAPQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKNWVKELQRQASPSIVIALAGNKSDLAAKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIANKLPKSEVSSGGAGTRVLNDADAPRSSSCCK-