DPOGS201964 | ||
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Transcript | DPOGS201964-TA | 549 bp |
Protein | DPOGS201964-PA | 182 aa |
Genomic position | DPSCF300060 - 574279-585503 | |
RNAseq coverage | 1395x (Rank: top 9%) |
Annotation | ||||
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Heliconius | HMEL006583 | 2e-94 | 90.96% |   |
Bombyx | BGIBMGA010544-TA | 9e-93 | 90.80% |   |
Drosophila | Mp20-PB | 2e-61 | 57.14% |   |
EBI UniRef50 | UniRef50_Q1HPV5 | 1e-94 | 90.66% | Muscular protein 20 n=1 Tax=Bombyx mori RepID=Q1HPV5_BOMMO |
NCBI RefSeq | NP_001040437.1 | 2e-95 | 90.66% | muscular protein 20 [Bombyx mori] |
NCBI nr blastp | gi|114051920 | 4e-94 | 90.66% | muscular protein 20 [Bombyx mori] |
NCBI nr blastx | gi|114051920 | 3e-94 | 90.66% | muscular protein 20 [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0005515 | 3.1e-52 | protein binding | |
KEGG pathway | rno:361084 | 3e-16 |   | |
  | K06084 (LMO7, FBXO20) | maps-> | Adherens junction | |
InterPro domain | [10-163] IPR001715 | 3.1e-52 | Calponin homology domain | |
[13-26] IPR003096 | 2.5e-31 | Smooth muscle protein/calponin | ||
[155-179] IPR000557 | 3.2e-09 | Calponin repeat | ||
Orthology group | MCL16227 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS201964-TA
ATGCCTGGACGTCCTATTTGGCAGTGCGCTGGCAAACGTGAGCCAGAAAAAGAAGCAGAAGCTCAAAGATGGGTAGAGGCTGTGATTGGAGAACAATTCCCGCCTGGTTTGCCTTACGAATTGGCATTGCGAGATGGAATCATCCTGTGTAAACTGATGAACAGGCTGCAGCCGGGCATAATCTCCAAAATCAATGTCTCTGGCGGTGACTATAAATTCATGGACAATATTAGCCAATTCCAAAAAGCCTGCGTAAAGTACGGTGTACCAGACGTAGACCTTTTCCAATCTACTGATCTTTGGGACCAGAAAAATATTTCCCTAGTCACACAAACAATTTTCGCTATTGGCAGAACGACACACAAGCATCCTGAATGGCGTGGCCCGTGGTTAGGCCCTAAACCCGCTGAAGAAAACCGACGGGAATTCAGCGAAGATGTTCTCCGAGCGGGAGAATCCGTGATCGGTCTACAGGCTGGTACAAACAAATTGGCATCACAGTCCGGACAAAACTTCGGTGCTTCGAGAAAGATCATACTCGGCAAGTGA
>DPOGS201964-PA
MPGRPIWQCAGKREPEKEAEAQRWVEAVIGEQFPPGLPYELALRDGIILCKLMNRLQPGIISKINVSGGDYKFMDNISQFQKACVKYGVPDVDLFQSTDLWDQKNISLVTQTIFAIGRTTHKHPEWRGPWLGPKPAEENRREFSEDVLRAGESVIGLQAGTNKLASQSGQNFGASRKIILGK-