| DPOGS201964 | ||
|---|---|---|
| Transcript | DPOGS201964-TA | 549 bp |
| Protein | DPOGS201964-PA | 182 aa |
| Genomic position | DPSCF300060 - 574279-585503 | |
| RNAseq coverage | 1395x (Rank: top 9%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL006583 | 2e-94 | 90.96% | |
| Bombyx | BGIBMGA010544-TA | 9e-93 | 90.80% | |
| Drosophila | Mp20-PB | 2e-61 | 57.14% | |
| EBI UniRef50 | UniRef50_Q1HPV5 | 1e-94 | 90.66% | Muscular protein 20 n=1 Tax=Bombyx mori RepID=Q1HPV5_BOMMO |
| NCBI RefSeq | NP_001040437.1 | 2e-95 | 90.66% | muscular protein 20 [Bombyx mori] |
| NCBI nr blastp | gi|114051920 | 4e-94 | 90.66% | muscular protein 20 [Bombyx mori] |
| NCBI nr blastx | gi|114051920 | 3e-94 | 90.66% | muscular protein 20 [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005515 | 3.1e-52 | protein binding | |
| KEGG pathway | rno:361084 | 3e-16 | ||
| K06084 (LMO7, FBXO20) | maps-> | Adherens junction | ||
| InterPro domain | [10-163] IPR001715 | 3.1e-52 | Calponin homology domain | |
| [13-26] IPR003096 | 2.5e-31 | Smooth muscle protein/calponin | ||
| [155-179] IPR000557 | 3.2e-09 | Calponin repeat | ||
| Orthology group | MCL16227 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS201964-TA
ATGCCTGGACGTCCTATTTGGCAGTGCGCTGGCAAACGTGAGCCAGAAAAAGAAGCAGAAGCTCAAAGATGGGTAGAGGCTGTGATTGGAGAACAATTCCCGCCTGGTTTGCCTTACGAATTGGCATTGCGAGATGGAATCATCCTGTGTAAACTGATGAACAGGCTGCAGCCGGGCATAATCTCCAAAATCAATGTCTCTGGCGGTGACTATAAATTCATGGACAATATTAGCCAATTCCAAAAAGCCTGCGTAAAGTACGGTGTACCAGACGTAGACCTTTTCCAATCTACTGATCTTTGGGACCAGAAAAATATTTCCCTAGTCACACAAACAATTTTCGCTATTGGCAGAACGACACACAAGCATCCTGAATGGCGTGGCCCGTGGTTAGGCCCTAAACCCGCTGAAGAAAACCGACGGGAATTCAGCGAAGATGTTCTCCGAGCGGGAGAATCCGTGATCGGTCTACAGGCTGGTACAAACAAATTGGCATCACAGTCCGGACAAAACTTCGGTGCTTCGAGAAAGATCATACTCGGCAAGTGA
>DPOGS201964-PA
MPGRPIWQCAGKREPEKEAEAQRWVEAVIGEQFPPGLPYELALRDGIILCKLMNRLQPGIISKINVSGGDYKFMDNISQFQKACVKYGVPDVDLFQSTDLWDQKNISLVTQTIFAIGRTTHKHPEWRGPWLGPKPAEENRREFSEDVLRAGESVIGLQAGTNKLASQSGQNFGASRKIILGK-