DPOGS202019 | ||
---|---|---|
Transcript | DPOGS202019-TA | 630 bp |
Protein | DPOGS202019-PA | 209 aa |
Genomic position | DPSCF300053 - 922818-924644 | |
RNAseq coverage | 430x (Rank: top 28%) |
Annotation | ||||
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Heliconius | HMEL016765 | 1e-112 | 94.74% |   |
Bombyx | BGIBMGA012568-TA | 2e-108 | 92.31% |   |
Drosophila | bigmax-PA | 3e-59 | 56.19% |   |
EBI UniRef50 | UniRef50_F2D6Y3 | 5e-67 | 65.28% | Predicted protein n=5 Tax=Eukaryota RepID=F2D6Y3_HORVD |
NCBI RefSeq | XP_001601355.1 | 6e-80 | 68.78% | PREDICTED: similar to bhlhzip transcription factor bigmax [Nasonia vitripennis] |
NCBI nr blastp | gi|345494329 | 9e-79 | 68.78% | PREDICTED: max-like protein X-like isoform 1 [Nasonia vitripennis] |
NCBI nr blastx | gi|307175350 | 4e-74 | 69.95% | Max-like protein X [Camponotus floridanus] |
Group | ||||
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Gene Ontology | GO:0005634 | 2e-20 | nucleus | |
GO:0006355 | 2e-20 | regulation of transcription, DNA-dependent | ||
KEGG pathway |   | |||
InterPro domain | [44-103] IPR011598 | 2e-20 | Helix-loop-helix DNA-binding | |
[45-100] IPR001092 | 3.7e-16 | Helix-loop-helix DNA-binding domain | ||
Orthology group | MCL13022 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS202019-TA
ATGTATCCTAGGTCAGGTAGTAGCGGTTCTTTGCAGAATATACATCAAACGCCGTCATCATCTAATCATAATTCAGAAGATGAAGATGATAGTGGAGATAATAAAGCATCTGCTTTGAGCTTCAAGGAAAGGCGAAGAGAAGCTCATACCCAGGCTGAACAGAAGAGGAGAGATGCTATAAAAAAAGGATATGATTCCCTCCAAGAATTGGTGCCAACCTGCCAGCAAACCGAGGCTTCCGGATACAAGCCTAGCAAAGCTGCTGTACTACAAAAATCAATAGATTATATCCAGTATCTACTGCAGCAACGTAGACGCCAGGAAGATGAACGTAATGCGCTACGCAAAGATGTCGTAGCTTTAAGGATAATGCAAGCTAACTATGAGCAGATAGTAAAAGCTCAGCATTCTGTACCTGGTCATAGTGAGCAACGGCTCTCTGATCAGGATAAGTTTCATGTGTTTCAGGGTATAATGGATAAACTGTTCGAATCCTTCGAGTCGGTACCAACAAACAACTTCGCTGAATTCTCAGCTGGTGTGTTCAATTGGCTAGAAGAATATTGCAAGCCGCAATCCCTTAGGACACTAGTCCATGGAGTTTTAAGGGAACAAAGCTATACGCCATAA
>DPOGS202019-PA
MYPRSGSSGSLQNIHQTPSSSNHNSEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQQTEASGYKPSKAAVLQKSIDYIQYLLQQRRRQEDERNALRKDVVALRIMQANYEQIVKAQHSVPGHSEQRLSDQDKFHVFQGIMDKLFESFESVPTNNFAEFSAGVFNWLEEYCKPQSLRTLVHGVLREQSYTP-