| DPOGS202070 | ||
|---|---|---|
| Transcript | DPOGS202070-TA | 615 bp |
| Protein | DPOGS202070-PA | 204 aa |
| Genomic position | DPSCF300053 + 1114855-1116997 | |
| RNAseq coverage | 313x (Rank: top 36%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL010600 | 2e-92 | 82.35% | |
| Bombyx | BGIBMGA002449-TA | 1e-114 | 95.10% | |
| Drosophila | RabX4-PA | 1e-89 | 81.08% | |
| EBI UniRef50 | UniRef50_Q9VC31 | 2e-87 | 81.08% | RabX4 n=28 Tax=Arthropoda RepID=Q9VC31_DROME |
| NCBI RefSeq | XP_002053827.1 | 2e-88 | 80.65% | GJ23131 [Drosophila virilis] |
| NCBI nr blastp | gi|332028544 | 3e-87 | 78.47% | Ras-related protein Rab-8A [Acromyrmex echinatior] |
| NCBI nr blastx | gi|332028544 | 3e-88 | 78.47% | Ras-related protein Rab-8A [Acromyrmex echinatior] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0007264 | 1.3e-89 | small GTPase mediated signal transduction | |
| GO:0005525 | 1.3e-89 | GTP binding | ||
| GO:0015031 | 1.3e-89 | protein transport | ||
| GO:0016020 | 2.4e-33 | membrane | ||
| GO:0007165 | 2.4e-33 | signal transduction | ||
| GO:0006184 | 2.4e-33 | GTP catabolic process | ||
| GO:0003924 | 2.4e-33 | GTPase activity | ||
| GO:0005622 | 4.1e-10 | intracellular | ||
| GO:0006886 | 4.8e-06 | intracellular protein transport | ||
| GO:0006913 | 4.8e-06 | nucleocytoplasmic transport | ||
| KEGG pathway | ||||
| InterPro domain | [9-173] IPR003579 | 1.3e-89 | Small GTPase superfamily, Rab type | |
| [10-171] IPR001806 | 1.1e-58 | Small GTPase superfamily | ||
| [6-173] IPR020849 | 2.4e-33 | Small GTPase superfamily, Ras type | ||
| [7-164] IPR005225 | 1.4e-27 | Small GTP-binding protein domain | ||
| [11-173] IPR003578 | 4.1e-10 | Small GTPase superfamily, Rho type | ||
| [14-205] IPR002041 | 4.8e-06 | Ran GTPase | ||
| Orthology group | MCL16693 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS202070-TA
ATGGCTTTAGATTTTTCTGCTACATATAAATTATTAGTTTTAGGTGATTCTAATGTCGGCAAAACGTGTATAGTGCACAGGTATTGTGACGAGAGATATTATGACATCTACATATCTACTATCGGTATAGACTTCAAACAAAAGATAATCAACTTGGACGGTGTACCAATCAAGCTACAAATATGGGACACCGCAGGTCAAGAGAGATTCAGAACACTTACAACAGCTTACTACAGAGGTGCTATGGGAATTATATTAATGTATGACATCACTAATCTGGAATCATTCAATCATTTGTCCTATTGGCTGAGAAACATTCAAGAGTACGCATCACCAGATGTTATTAAAGTTTTAGTGGGCAATAAATGCGACGTGCACGAGAATCACCGTGCCGTTCCTAGGGAAAGAGGACAAAAGATCGCAGATGATTTTGATATGCCATTTTTTGAAGTGTCCTGTAAAAGTAATATAAATATCGAAGAAGCGTTTGTGACGTTGGCCAGAAAGATACGGGAATACCGAGAGACGAAGGCGGACGCGTTCGAGTTGAAGGAAAGAGACAACGTCATCAAAGCCTCTGAATCCGAGACAGACGTCTCGAAGTGTAGTTGTTAG
>DPOGS202070-PA
MALDFSATYKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAGQERFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIKVLVGNKCDVHENHRAVPRERGQKIADDFDMPFFEVSCKSNINIEEAFVTLARKIREYRETKADAFELKERDNVIKASESETDVSKCSC-