DPOGS202071 | ||
---|---|---|
Transcript | DPOGS202071-TA | 375 bp |
Protein | DPOGS202071-PA | 124 aa |
Genomic position | DPSCF300053 + 1150839-1151213 | |
RNAseq coverage | 0x (Rank: top 96%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL014373 | 2e-12 | 43.43% |   |
Bombyx | % |   | ||
Drosophila | % |   | ||
EBI UniRef50 | UniRef50_G3E4N4 | 9e-23 | 44.00% | Putative uncharacterized protein n=1 Tax=Pectinophora gossypiella RepID=G3E4N4_PECGO |
NCBI RefSeq | XP_001600880.1 | 1e-21 | 44.72% | PREDICTED: hypothetical protein [Nasonia vitripennis] |
NCBI nr blastp | gi|343481903 | 4e-22 | 44.00% | unknown [Pectinophora gossypiella] |
NCBI nr blastx | gi|343481903 | 5e-22 | 44.00% | unknown [Pectinophora gossypiella] |
Group | ||||
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Gene Ontology | GO:0003964 | 4.6e-12 | RNA-directed DNA polymerase activity | |
GO:0003723 | 4.6e-12 | RNA binding | ||
GO:0006278 | 4.6e-12 | RNA-dependent DNA replication | ||
KEGG pathway | hmg:100208869 | 9e-13 |   | |
  | K03010 (RPB2) | maps-> | Huntington's disease | |
  |   |   | Purine metabolism | |
  |   |   | Pyrimidine metabolism | |
  |   |   | RNA polymerase | |
InterPro domain | [18-113] IPR000477 | 4.6e-12 | Reverse transcriptase | |
Orthology group | MCL10176 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS202071-TA
ATGGATGGAATGGAAAAAATCTTACAAATAGATTCTGTTTACACTGATTTCGCCTTCGATTTTGTAGACCATTCAATACTCACCGATAAGCTCCACAATCAGAATGGTATCTGCAACGCCATGTTGAATTGGTTTGCTTCATATTTGTCGAACCGTATGCAGACTGTTGTGATCAATGGTTATGAATTGGAGAGATGTATTGCCTCCTCAGGTGTGCCTCAAGACTCGCATTTGGGGTCAGCATTGTTTCTGCTTTTTATCAACGATATCGGTCAACAGATTCGTCATTGCAGATACTCCCTCTTTGCTGACGCCATGAAGATTTCTCGAAAAATTGAAACAAATGCAGAAGTTGAATTGATGCAAGCCGATTAA
>DPOGS202071-PA
MDGMEKILQIDSVYTDFAFDFVDHSILTDKLHNQNGICNAMLNWFASYLSNRMQTVVINGYELERCIASSGVPQDSHLGSALFLLFINDIGQQIRHCRYSLFADAMKISRKIETNAEVELMQAD-