| DPOGS202108 | ||
|---|---|---|
| Transcript | DPOGS202108-TA | 759 bp |
| Protein | DPOGS202108-PA | 252 aa |
| Genomic position | DPSCF300150 - 322824-324149 | |
| RNAseq coverage | 263x (Rank: top 41%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL002387 | 8e-101 | 72.33% | |
| Bombyx | BGIBMGA006899-TA | 6e-79 | 59.13% | |
| Drosophila | E2f-PA | 1e-23 | 41.45% | |
| EBI UniRef50 | UniRef50_Q2F6B1 | 1e-76 | 59.13% | E2F transcription factor 4-like protein n=2 Tax=Obtectomera RepID=Q2F6B1_BOMMO |
| NCBI RefSeq | NP_001040298.1 | 3e-77 | 59.13% | E2F transcription factor 4-like protein [Bombyx mori] |
| NCBI nr blastp | gi|114051451 | 5e-76 | 59.13% | E2F transcription factor 4-like protein [Bombyx mori] |
| NCBI nr blastx | gi|114051451 | 3e-76 | 59.45% | E2F transcription factor 4-like protein [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0006355 | 5.6e-22 | regulation of transcription, DNA-dependent | |
| GO:0005667 | 5.6e-22 | transcription factor complex | ||
| GO:0003700 | 5.6e-22 | sequence-specific DNA binding transcription factor activity | ||
| KEGG pathway | cin:778585 | 7e-55 | ||
| K04682 (E2F4_5) | maps-> | TGF-beta signaling pathway | ||
| Cell cycle | ||||
| InterPro domain | [9-185] IPR015633 | 4.4e-72 | E2F Family | |
| [7-76] IPR011991 | 3.5e-27 | Winged helix-turn-helix transcription repressor DNA-binding | ||
| [9-75] IPR003316 | 5.6e-22 | Transcription factor E2F/dimerisation partner (TDP) | ||
| Orthology group | MCL16480 | Patchy | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS202108-TA
ATGGCAGAGCTGTACTCTTATAAAAGGTATGAAAAATCACTTGGATTGCTTACAACGAGGTTCGTGTCTTTACTTAAAAAAGCAAAGGATGGAGTTTTAGATTTAAAAATCGCAACTGATTTATTGGCAGTAAGACAAAAACGGCGAATTTATGATATAACTAACGTTCTAGAGGGAATTGGTTTGATAGAAAAGCGAAGTAAGAATAGTATACAATGGAAGGGTGCCAGTCCAGATGGAAATACATCAGAAATTGGTAAAAAAGTGACACTTCTAAGGAAACAAATAGGTCTTTTGGAGGAACATGAAGAGTTATTAGACAAGCAAATGCACTGGATTGAGCAAAGTATAAAGAATGTCATAGATGATGCTGATAATGATGCTTTGTCTTATGTGACTCAAAATGATGTAAAAAACTGTTTCCATGATAGTCAAGTGCTTGTATTGGAAGCACCACTTGGGGCCAATTTATCAGTTGGGCAATTAGATGAGGGTGCAGGCGAAGATCAGTATTTTCTACATTTAAAATCAAATGAACCTGTTGGTGTTATACTTTTGTGTGATGTTGAAAAGGATAAGATTGTAGATGACGATACTATGGATGAGGAAGTAGAATGGTATGGGGATAGTGGGACTACAAATTCACAAGAATACCTTTTAAGGCTAAGCCCGCCAGTAACAAAACAGGATTTCTCATTTTCTCTATATGGTACTGAAGGACTATGTGACTTATTTGATATTCCATATCCTAATCAATAG
>DPOGS202108-PA
MAELYSYKRYEKSLGLLTTRFVSLLKKAKDGVLDLKIATDLLAVRQKRRIYDITNVLEGIGLIEKRSKNSIQWKGASPDGNTSEIGKKVTLLRKQIGLLEEHEELLDKQMHWIEQSIKNVIDDADNDALSYVTQNDVKNCFHDSQVLVLEAPLGANLSVGQLDEGAGEDQYFLHLKSNEPVGVILLCDVEKDKIVDDDTMDEEVEWYGDSGTTNSQEYLLRLSPPVTKQDFSFSLYGTEGLCDLFDIPYPNQ-