MonarchBase - Protein-coding gene

DPOGS202155
Transcript	DPOGS202155-TA	2490 bp
Protein	DPOGS202155-PA	829 aa
Genomic position	DPSCF300162 - 94504-96993
RNAseq coverage	555x (Rank: top 23%)

Annotation
*Heliconius*	HMEL010879	89.37%
*Bombyx*	BGIBMGA003429-TA	83.33%
*Drosophila*	CG10333-PA	75.74%
EBI UniRef50	UniRef50_Q9BUQ8	64.71%	Probable ATP-dependent RNA helicase DDX23 n=107 Tax=Eukaryota RepID=DDX23_HUMAN
NCBI RefSeq	XP_002038991.1	75.03%	GM17282 [Drosophila sechellia]
NCBI nr blastp	gi\|312375100	78.47%	hypothetical protein AND_15065 [Anopheles darlingi]
NCBI nr blastx	gi\|157121045	73.58%	DEAD box ATP-dependent RNA helicase [Aedes aegypti]

Group
Gene Ontology	GO:0005524	3.8e-51	ATP binding
	GO:0008026	3.8e-51	ATP-dependent helicase activity
	GO:0003676	3.8e-51	nucleic acid binding
	GO:0004386	1.7e-34	helicase activity
KEGG pathway	dse:Dsec_GM17282	0.0
	K12858 (DDX23, PRP28)	maps->	Spliceosome
InterPro domain	[420-651] IPR014001	2.2e-62	DEAD-like helicase
	[425-625] IPR011545	3.8e-51	DNA/RNA helicase, DEAD/DEAH box type, N-terminal
	[687-768] IPR001650	1.7e-34	Helicase, C-terminal
Orthology group	MCL13101		Single-copy universal gene

Nucleotide sequence:

>DPOGS202155-TA
ATGGGTAGAGAAAGAAGCGCAGAACGTCGACGATCTCGTTCTCGAGATAGGCGTGAGAGGGACCGTCACGATGACCGCGATACTTATAAAGATAAATTAAAACGACGTGATAGATCCAGAAGCCCGAGGAAAGAAAAATCCCGTAGTCCTTCGAAAAAGGAATCAGACGTTCGCTCTCGTAGCCCAAGAAGAGAAAAAGAGCGTTCCAGAAGTCCGATTCGTAAAGAACGCGCCCGCTCTAGAAGTCCACGTAAACGTGATGGCAAAGATAAAGACCGGCGGCCAGATGACAGAGAGAAGAATAAAACTAAAAAGGAAGAAGAGAAAACAGAGGAAGAACCCAAAATGGAAGAAGAACCTAAGCCCGTAAAACGAGAGCCTCTATCTCTAGAAGAGTTACTCGCCAAAAAGAAGGCTGAAGAAGAGGCGCGAAGTAAACCAGTATTCTTAACAAAGGAACAACGAGCAGCCTTGGCACTCGAAAGACGCAGAGAACAAGTTGAAGCCATGAGAGCTGCTGAACGACCAGCTGCGGTGGCGACGATAGATCTTACAGGAACTTCAAAGAAGGATGATGAAAAAAAATACCGTGACGACAGGGAAAAAGAAAGGGAACACGACAAAGAGCGAGAAAGAGAAAGAGAGCGAGAAAGAGAGAAAGAAAGAGAAAGAAGACACGAAGAGAGAAAATCAGGGGCCGATCGTAATAGAGATGATAAAAAAGAGAAAAATGAAGAATACAGCAAAACTAAAGATAAAGAAAGAGAGGAAGAAGCCATCAAAGCGAGGTACTTAGGTATAGTTAAAAAAAAGCGTCGAGTGAGACGGTTAAATGATCGGAAGTTTGTATTTGATTGGGACGCTTCTGAAGACACATCAAATGATTACAATGCACTTTATAAGGAGAGACATCAAGTGCAATTTTTTGGACGCGGCCACATTGCTGGCATTGATATTAAATCACAGAAAAAGGATTATTGCAAATTCTATGGCAATTTGTTGGAGAAAAGGAGAACAGAATTGGAGAAAGAACAAGAAAAATCTCGCCTAAAGAAAGTTAAGAAGAAGGAAGACAAACAGAAATGGGATGACAGACACTGGTCGGAGAAAGATCAAGATGAGATGACAGAGAGAGATTGGAGAATCTTCAGAGAGGATTACAATATTACTTTGAAAGGTGGAAGAATACCTAATCCGATTCGTTCATGGAAAGAAGCTAACTTTCATGAAGATATTATGGAGATCATTAGCAAAGTTGGCTACAAAAGCCCTACACCTATTCAACGACAAGCCATTCCAATTGGTCTTCAAAATAGGGACATAATTGGTGTAGCTGAAACTGGTTCTGGTAAAACATTAGCATTTCTCATACCACTGCTTACTTGGATACAGTCTTTGCCTAAAAATGAGAGGATGGAAGATGCTGATCAAGGTCCGTATGCTATAATTCTGGCCCCAACTCGTGAATTGGCACAACAAATTGAGGAAGAAACAAATAAGTTCGGTATACCGCTTGGTATAACATCTGTCGTTGTTGTGGGAGGTCTGTCGAGGGAGGAGCAAGGATTCAAGTTACGTCTAGGATGTGAGATCGTCATCGCCACGCCGGGTCGTCTCATAGACGTATTAGAAAATCGATATCTTGTGCTCAATCGCTGCACTTATGTGGTTCTTGACGAAGCCGATCGTATGATAGACATGGGTTTCGAACCTGATGTACAAAAAATTCTCGAATACATGCCCGTGTCTAACATAAAACCCGACACAGATGCTGCCGAGGACGCATCAGTGCTTCTTGCTAATTACAATTCTAAAAAGAAATTCCGTCAAACCGTGATGTTCACGGCTACTATGCCGCCGGCCGTTGAAAGACTCGCCCGAACATATTTACGTAGGCCGGCCATAGTGTACATCGGATCTGTTGGCAAACCAGTCGACAGAACAGAACAAGTCGTCTTCATGATCGGTGAGAATGAGAAACGCAGGAAGCTAACTGAGATATTACAACGCGGAGTCGAACCACCGATCATTATATTCGTCAACCAAAAGAAGGGTGCAGATGTTCTTGCGAAAGGTTTGGAAAAACTGGGTTTCAATGCCTGTACATTACATGGTGGTAAAGGCCAGGAACAACGTGACTTCGCTCTAGCTTCCCTCAAAAATGGTTCGAAGGATATACTGGTTGCTACAGATGTGGCCGGTCGTGGTATTGATATTAAAGATGTCAGTGTGGTCATTAATTATGACATGGCTAAGAGTATAGAAGACTACACACATCGCATTGGTCGTACCGGTCGTGCTGGCAAGACTGGTAAGGCTGTATCATTTGTTACTAAAGAGGATTCTGCTATATACTATGATCTGAAGCAAGTGCTACTCGCCAGCTCAGTGTCCACATGCCCTCCAGAGTTAATGAACCATCCAGAGGCTCAACACAAACCCGGAACTGTGGTAACCAAGAAGAGAAGAGAGGAAATGATATTTGCTTAA

Protein sequence:

>DPOGS202155-PA
MGRERSAERRRSRSRDRRERDRHDDRDTYKDKLKRRDRSRSPRKEKSRSPSKKESDVRSRSPRREKERSRSPIRKERARSRSPRKRDGKDKDRRPDDREKNKTKKEEEKTEEEPKMEEEPKPVKREPLSLEELLAKKKAEEEARSKPVFLTKEQRAALALERRREQVEAMRAAERPAAVATIDLTGTSKKDDEKKYRDDREKEREHDKEREREREREREKERERRHEERKSGADRNRDDKKEKNEEYSKTKDKEREEEAIKARYLGIVKKKRRVRRLNDRKFVFDWDASEDTSNDYNALYKERHQVQFFGRGHIAGIDIKSQKKDYCKFYGNLLEKRRTELEKEQEKSRLKKVKKKEDKQKWDDRHWSEKDQDEMTERDWRIFREDYNITLKGGRIPNPIRSWKEANFHEDIMEIISKVGYKSPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLTWIQSLPKNERMEDADQGPYAIILAPTRELAQQIEEETNKFGIPLGITSVVVVGGLSREEQGFKLRLGCEIVIATPGRLIDVLENRYLVLNRCTYVVLDEADRMIDMGFEPDVQKILEYMPVSNIKPDTDAAEDASVLLANYNSKKKFRQTVMFTATMPPAVERLARTYLRRPAIVYIGSVGKPVDRTEQVVFMIGENEKRRKLTEILQRGVEPPIIIFVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKNGSKDILVATDVAGRGIDIKDVSVVINYDMAKSIEDYTHRIGRTGRAGKTGKAVSFVTKEDSAIYYDLKQVLLASSVSTCPPELMNHPEAQHKPGTVVTKKRREEMIFA-

Monarch geneset OGS2.0

Nucleotide sequence:

Protein sequence: