Monarch geneset OGS2.0

DPOGS202160
TranscriptDPOGS202160-TA951 bp
ProteinDPOGS202160-PA316 aa
Genomic positionDPSCF300162 - 46758-48906
RNAseq coverage13144x (Rank: top 1%)
Annotation
HeliconiusHMEL0036962e-16596.84% 
BombyxBGIBMGA003309-TA1e-15892.09% 
DrosophilaRpLP0-PA8e-13981.39% 
EBI UniRef50UniRef50_A7SQ366e-11164.87%Predicted protein n=10 Tax=Eukaryota RepID=A7SQ36_NEMVE
NCBI RefSeqNP_001037123.15e-15792.09%ribosomal protein P0 [Bombyx mori]
NCBI nr blastpgi|3423563496e-16296.52%ribosomal protein P0 [Heliconius melpomene cythera]
NCBI nr blastxgi|3151153594e-17197.78%ribosomal protein P0 [Euphydryas aurinia]
Group
Gene OntologyGO:00422549.2e-24ribosome biogenesis
GO:00056229.2e-24intracellular
GO:00058403.1e-22ribosome
GO:00064143.1e-22translational elongation
GO:00037353.1e-22structural constituent of ribosome
KEGG pathwaytca:6566532e-147 
 K02941 (RP-LP0, RPLP0)maps-> Ribosome
InterPro domain[6-105] IPR0017909.2e-24Ribosomal protein L10/acidic P0
[231-315] IPR0018133.1e-22Ribosomal protein 60S
Orthology groupMCL11490 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS202160-TA
ATGGGTAGGGAGGACAAGGCCTCATGGAAGACCAACTACTTCACTAAGATAATTCAATTGTTAGACGAGTACCCAAAATGCTTCATCGTGGGTGCCGACAATGTGGGCTCGCAGCAAATGCAGCAAATCCGTATCTCCCTCCGTGGGAGCAGCATTGTACTCATGGGCAAGAACACCATGATGCGTAAGGCCATCAAGGATCATTTGGAGACCAACCCAGCCCTTGAGAAGCTCCTGCCCCACATCAAAGGCAATGTTGGCTTTGTGTTCACCCGCGGAGATCTTGTCGAGGTCCGTGACAAGCTTCTGGAGAACAAAGTGCGTGCCCCGGCTCGTCCAGGAGCTATTGCTCCTCTGGCTGTGGTCATTCCAGCTCATAACACTGGTTTGGGTCCCGAGAAAACTGCCTTCTTCCAGGCTCTCTCCATCCCCACCAAGATCTCCAAGGGTACTATTGAAATCATCAACGATGTCCACATCCTGAAGCCCGGAGACAAAGTGGGAGCTTCTGAGGCAACTCTTCTCAACATGTTAAACATTTCTCCCTTCTCATATGGTCTAGTTGTGAAACAGGTCTATGACTCTGGCACCATCTTTGCCCCGGCTATCCTTGACATCAAGCCCGAGGACTTGCGTGCCAAGTTCCAAGAGGGAGTAGCCAATGTTGCCGCCCTCTCTTTGGCTATTGGATACCCGACCGTGGCCTCTGCCCCTCACTCCATTGCCAACGGATTCAAGAACCTCCTGGCTATCGCTGCCGTCACCGAGGTTGAGTTCAAGGAAGCCAACACCATCAAGGAGTTCATCAAGGACCCTAGCAAGTTTGTTGCTGCTGTTGCTGCCCCGGCAGCGGCTGCTGCTCCTGCCGCAGCCAAGAAGGAAGAGGAGAAGAAGCCCGAGAAGGAAGAATCCGAGAGCGATGACGACATGGGTTTCGGACTCTTTGACTAA

Protein sequence:

>DPOGS202160-PA
MGREDKASWKTNYFTKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVRAPARPGAIAPLAVVIPAHNTGLGPEKTAFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPAILDIKPEDLRAKFQEGVANVAALSLAIGYPTVASAPHSIANGFKNLLAIAAVTEVEFKEANTIKEFIKDPSKFVAAVAAPAAAAAPAAAKKEEEKKPEKEESESDDDMGFGLFD-