| DPOGS202188 | ||
|---|---|---|
| Transcript | DPOGS202188-TA | 552 bp |
| Protein | DPOGS202188-PA | 183 aa |
| Genomic position | DPSCF300149 - 557210-557896 | |
| RNAseq coverage | 418x (Rank: top 29%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL009176 | 2e-48 | 56.52% | |
| Bombyx | BGIBMGA013486-TA | 1e-85 | 80.98% | |
| Drosophila | CG7375-PA | 1e-28 | 39.22% | |
| EBI UniRef50 | UniRef50_Q6NY82 | 1e-60 | 61.67% | NEDD8-conjugating enzyme UBE2F n=42 Tax=Eumetazoa RepID=UBE2F_DANRE |
| NCBI RefSeq | XP_001662144.1 | 3e-69 | 67.98% | nedd8-conjugating enzyme nce2 [Aedes aegypti] |
| NCBI nr blastp | gi|157131157 | 5e-68 | 67.98% | nedd8-conjugating enzyme nce2 [Aedes aegypti] |
| NCBI nr blastx | gi|157131157 | 2e-67 | 68.36% | nedd8-conjugating enzyme nce2 [Aedes aegypti] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0016881 | 6.6e-33 | acid-amino acid ligase activity | |
| KEGG pathway | aag:AaeL_AAEL012011 | 9e-69 | ||
| K10687 (UBE2F) | maps-> | Ubiquitin mediated proteolysis | ||
| InterPro domain | [28-179] IPR016135 | 4.6e-43 | Ubiquitin-conjugating enzyme/RWD-like | |
| [33-175] IPR000608 | 6.6e-33 | Ubiquitin-conjugating enzyme, E2 | ||
| Orthology group | MCL16015 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS202188-TA
ATGATAACACTAAATAGAAAATTCAAAAAGGAACATACGGAGGTTCCCAATGGTGTTATTGAGCCGTTGAGAAGGATATCAGTGAGAGACAAATTATTAGTTAAGGAAGTGCAGGAGATGAACGAAAACCTTCCCGCGACGTGTTCAATTAATTTTGAAGACCCTAATTTATTGAGTGAATTTATTTTGACAGTTAGTCCTGATGAGGGCTATTGGGCTGGAGGCAAATTTAAATTTAGTATTTATGTGACTGAGGATTATAATATGGCGCCACCAAAAGTAAAATGTTTGACCCGTCTCTGGCATCCTAATATTAATGAAGATGGAGAAATATGTCTTTCGCTTCTACGACAAACCTCAATAGATGAACATGGGTGGGCACCGACCAGGAGGCTCAAGGATGTTGTTTGGGGACTGAACTCTTTATTTACTGATCTCCTTAATTTTGAGGACCCTCTGAACATACAAGCAGCCGAGATGTATAAGAAAAATAAAAGTGAATTTCAAACTAAAGTACAGGAGTATATATCTGTGTCGAAGGGGAAGAGATGA
>DPOGS202188-PA
MITLNRKFKKEHTEVPNGVIEPLRRISVRDKLLVKEVQEMNENLPATCSINFEDPNLLSEFILTVSPDEGYWAGGKFKFSIYVTEDYNMAPPKVKCLTRLWHPNINEDGEICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFEDPLNIQAAEMYKKNKSEFQTKVQEYISVSKGKR-