| DPOGS202201 | ||
|---|---|---|
| Transcript | DPOGS202201-TA | 576 bp |
| Protein | DPOGS202201-PA | 191 aa |
| Genomic position | DPSCF300149 - 256439-257369 | |
| RNAseq coverage | 748x (Rank: top 17%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL009198 | 4e-89 | 76.44% | |
| Bombyx | BGIBMGA013513-TA | 2e-76 | 76.79% | |
| Drosophila | mRpS11-PA | 5e-59 | 64.74% | |
| EBI UniRef50 | UniRef50_B4NJZ4 | 4e-58 | 60.56% | GK13384 n=9 Tax=Endopterygota RepID=B4NJZ4_DROWI |
| NCBI RefSeq | XP_002073010.1 | 8e-59 | 60.56% | GK13384 [Drosophila willistoni] |
| NCBI nr blastp | gi|195451635 | 1e-57 | 60.56% | GK13384 [Drosophila willistoni] |
| NCBI nr blastx | gi|91087153 | 1e-56 | 59.46% | PREDICTED: similar to AGAP003644-PA [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 2.2e-69 | ribosome | |
| GO:0006412 | 2.2e-69 | translation | ||
| GO:0005622 | 2.2e-69 | intracellular | ||
| GO:0003735 | 2.2e-69 | structural constituent of ribosome | ||
| KEGG pathway | mag:amb3109 | 5e-18 | ||
| K02948 (RP-S11, rpsK) | maps-> | Ribosome | ||
| InterPro domain | [34-191] IPR001971 | 2.2e-69 | Ribosomal protein S11 | |
| Orthology group | MCL14839 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS202201-TA
ATGTTTACAATTCTAAGAAATACCTTAAGGCTTTCTATAAACAATCTAGTTCGACCTTTTAATACAACAACACCTACAGCTACTGAAAAATTTGACCATAAAAGAATTCCCGCAGACGACGAGGGAGTGCAGGGAGAGAAGATTGTTGATATAGATTCAGTTTTACAAACAAAACAAAATTTATTCCCAACGGCAGATTCGGATAATCTTCTTTTTGATGGTGTACCCTACAAAGACCTGGCAATATGTAACGTCAGAGTGAGTCACAACAACACCATCTTCACAATTACTGATGCTGAAGGGAAAGTTAAGCTTCTACGATCCTGTGGTATTGAAGGTTTCAAAAACACTAAAAAAGGCACCAACATCGCTGCTCAGACGACTGCTATTAATATAGCCAATAAAGCAATCGAAAAGGGATTTAGAACCATAAGAGTTCGAGTGAGAGGCCTGGGACCGGGGAGATTGTCAGCGGTCAAAGGATTACAGATGGGAGGACTTCAAATAGTCTCTGTGACAGATAATACAAGGGTGTCATGGAACCCACCGCGACCCCGCAAGGCGAAACGATTGTAG
>DPOGS202201-PA
MFTILRNTLRLSINNLVRPFNTTTPTATEKFDHKRIPADDEGVQGEKIVDIDSVLQTKQNLFPTADSDNLLFDGVPYKDLAICNVRVSHNNTIFTITDAEGKVKLLRSCGIEGFKNTKKGTNIAAQTTAINIANKAIEKGFRTIRVRVRGLGPGRLSAVKGLQMGGLQIVSVTDNTRVSWNPPRPRKAKRL-